Pregled po projektu: Generiranje potencijalnih lijekova u uvjetima in silico (MB: MZOS-058-0000000-3475)
Pronađeno 62 radova
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26.Starcevic, Antonio; Zucko, Jurica; Diminic, Janko; Long F Paul; Cullum, John; Hranueli, DaslavGenomic data analysis - "What Would Google Do? // CIPKEBIP Annual Conference 2011 Program "Biosynthetic and metabolic engineering in industrial drug and process development" / Livija Tušar, Enej Kuščer, Hrvoje Petković, Dušan Turk (ur.).
Ljubljana: Centre of Excellence for Integrated Approaches in Chemistry and Biology of Protein, 2011. str. 11-11 (pozvano predavanje, međunarodna recenzija, sažetak, znanstveni) -
27.Gluhak, DianaDiet and genes – assessments of Diabetes mellitus type 2 biological networks, 2011., diplomski rad, diplomski, Prehrambeno-biotehnološki fakultet, Zagreb
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28.Baranašić, DamirFunctional classification of Adenylation domains by Latent Semantic Indexing (LSI), 2011., diplomski rad, diplomski, Prehrambeno-biotehnološki fakultet, Zagreb
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29.Starčević, Antonio; Diminić, Janko; Žučko, Jurica; Elbekali, Mouhsine; Schlosser, Tobias; Lisfi, Mohamed; Vukelić, Ana; Long, F Paul; Hranueli, Daslav; Cullum, JohnA novel docking domain interface model that can predict recombination between homoeologous modular biosynthetic gene clusters // Journal of industrial microbiology & biotechnology, 38 (2011), 9; 1295-1304 doi:10.1007/s10295-010-0909-0 (međunarodna recenzija, članak, znanstveni)
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30.Žučko, Jurica; Cullum, John; Hranueli, Daslav; Long, Paul F.Evolutionary dynamics of modular polyketide synthases with implications for protein design and engineering // Journal of antibiotics, 64 (2011), 1; 89-92 doi:10.1038/ja.2010.141 (međunarodna recenzija, članak, znanstveni)
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31.Cullum, John; Starčević, Antonio; Žučko, Jurica; Diminić, Janko; Long, Paul F.; Hranueli, DaslavClustScan : an integrated program package for the detection and semi-automatic annotation of secondary metabolite clusters in genomic and metagenomic DNA data sets // Handbook of Molecular Microbial Ecology, Volume I: Metagenomics and Complementary Approaches / de Bruijn, J. Frans (ur.).
Hoboken (NJ): John Wiley & Sons, 2011. str. 423-432 -
32.Cullum, John; Zucko, Jurica; Long, F Paul; Hranueli, DaslavThe evolution of modular polyketide synthases // SMBE 2010 - Annual Meeting of the Society for Molecular Biology and Evolution
Lyon, 2010. (predavanje, međunarodna recenzija, sažetak, znanstveni) -
33.Starcevic, Antonio; Dunlap, C. Walter; Cullum, John; Shick, J. Malcolm; Hranueli, Daslav; Long, F PaulGene expression in the scleractinian Acropora microphthalma exposed to high solar irradiance reveals elements of photoprotection and coral bleaching // PLoS ONE, 5 (2010), 11; e13975-1 doi::10.1371/journal.pone.0013975 (međunarodna recenzija, članak, znanstveni)
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34.Zucko, Jurica; Dunlap, C. Walter; Shick, J. Malcolm; Cullum, John; Cercelet, Francois; Amin, Bijal; Hammen, Lena; Lau, Timothy; Williams, Jamal; Hranueli, Daslav; Long, F PaulGlobal genome analysis of the shikimic acid pathway reveals greater gene loss in host-associated than in free-living bacteria // Bmc genomics, 11 (2010), -. doi::10.1186/1471-2164-11-628 (međunarodna recenzija, članak, znanstveni)
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35.Žučko, JuricaIn silico analysis of polyketide synthases, 2010., doktorska disertacija, Fachbereich Biologie, Kaiserslautern
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36.Rešetar, DinaRačunalom potpomognuta klasifikacija neribosomalno sintetiziranih peptida, 2010., diplomski rad, Prehrambeno-biotehnološki fakultet, Zagreb
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37.Žučko, Jurica; Starčević, Antonio; Diminić, Janko; Elbekali, Mouhsine; Lisfi, Mohamed; Long, Paul F.; Cullum, John; Hranueli, DaslavFrom DNA Sequences to Chemical Structures – Methods for Mining Microbial Genomic and Metagenomic Datasets for New Natural Products // Food technology and biotechnology, 48 (2010), 2; 234-242 (međunarodna recenzija, članak, znanstveni)
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38.Goldstein, Pavle; Žučko, Jurica; Vujaklija, Dušica; Kriško, Anita; Hranueli, Daslav; Long, Paul F.; Etchebest, Catherine; Basrak, Bojan; Cullum, JohnClustering of protein domains for functional and evolutionary studies // BMC bioinformatics, 10 (2009), 335, 11 doi:10.1186/1471-2105-10-335 (međunarodna recenzija, članak, znanstveni)
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39.Starčević, AntonioIn silico studies of modular biosynthetic clusters, 2009., doktorska disertacija, Fachbereich Biologie, Kaiserslautern
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40.Trninić, IdaAnotacija genskih nakupina poliketida i hibridnih sustava u genomu bakterije Streptomyces scabies, 2009., diplomski rad, Prehrambeno-biotehnološki fakultet, Zagreb
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41.Starcevic, Antonio; Akthar, Shamima; Dunlap, C. Walter; Shick, Malcolm; Hranueli, Daslav; Cullum, John; Long, F. PaulEnzymes of the shikimic acid pathway encoded in the genome of the sea anemone Nematostella vectensis have microbial origins // 6th ISS Congress
Madison (WI): International Symbiosis Society, 2009. (poster, međunarodna recenzija, sažetak, znanstveni) -
42.Cullum, John; Sonicki, Zdenko; Starčević, Antonio; Žučko, Jurica; Diminić, Janko; Long, F. Paul; Hranueli, DaslavTowards providing analyses of individual human genomes // Abstracts of the 8th Balkan Meeting on Human Genetics ; u: Pediatria Croatica (2009) S / Barišić, Ingeborg (ur.).
Zagreb: Croatian Society of Human Genetics, Croatian Society for Rare Diseases, Croatian Medical Association, 2009. str. 82 (25-GP) (predavanje, međunarodna recenzija, sažetak, stručni) -
43.Hranueli, Daslav; Sonicki, Zdenko; Starčević, Antonio; Žučko, Jurica; Diminić, Janko; Long, Paul F.; Cullum, JohnBioinformatics tools towards human genome analysis // Abstracts of the 8th Balkan Meeting on Human Genetics ; u: Pediatria Croatica (2009) S / Barišić, Ingeborg (ur.).
Zagreb: Croatian Society of Human Genetics, Croatian Society for Rare Diseases, Croatian Medical Association, 2009. str. 82 (24-GP) (predavanje, međunarodna recenzija, sažetak, ostalo) -
44.Cullum, John; Starčević, Antonio; Žučko, Jurica; Elbekali, Mouhsine; Škunca, Nives; Kovaček, Damir; Diminić, Janko; Zeljeznak, Vedran; Pavlinušić, Dobrica; Šimunković, Jurica et al.In silico generation of novel polyketides for the use in agro-industry // Proceedings of the 2008 Joint Central European Congress : the 4th Central European Congress on Food & the 6th Croatian Congress of Food Technologists, Biotechnologists and Nutritionists / Ćurić, Duška (ur.).
Zagreb: Hrvatska gospodarska komora (HGK), 2008. str. 287-294 (pozvano predavanje, domaća recenzija, cjeloviti rad (in extenso), znanstveni) -
45.Long, Paul F.; Starčević, Antonio; Žučko, Jurica; Dunlap, Walter C.; Shick, Malcom J.; Cullum, John; Hranueli, DaslavComputational strategies to unravel secondary metabolic pathways in microorganisms // AMI Association of Microbiologists of India 49th Annual Conference - International Symposium on Microbial Biotechnology : Diversity, Genomics and Metagenomics / Rup Lal (ur.).
Delhi: University of Delhi, 2008. str. 287-287 (predavanje, sažetak, znanstveni) -
46.Starčević, Antonio; Žučko, Jurica; Šimunković, Jurica; Long, Paul F.; Cullum, John; Hranueli, DaslavClustScan : An integrated program package for the semi-automatic annotation of modular biosynthetic gene clusters and in silico prediction of novel chemical structures // Nucleic acids research, 36 (2008), 21; 6882-6892 doi:10.1093/nar/gkn685 (međunarodna recenzija, članak, znanstveni)
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47.Castaldo, Gaetano; Žučko, Jurica; Heidelberger, Sibylle; Vujaklija, Dušica; Hranueli, Daslav; Wattana-Amorn, Pakorn; Crump, P. Matthew; Crosby, John; Long, F. PaulProposed arrangement of proteins forming a bacterial type II polyketide synthase // Chemistry & biology, 15 (2008), 11; 1156-1165 doi:10.1016/j.chembiol.2008.09.010 (međunarodna recenzija, članak, znanstveni)
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48.Hranueli, Daslav; Starčević, Antonio; Žučko, Jurica; Long, Paul F.; Cullum, JohnBioinformatic tools for mining large DNAS data sets // 4th Congress of the Slovenian Microbiological Society with International Participation : Microbiology for today : Book of abstracts / Darja Barlič-Maganja, Darja ; Raspor, Peter (ur.).
Ljubljana: Slovenian Microbiological Society, 2008. str. 139-139 (pozvano predavanje, sažetak, znanstveni) -
49.Diminic, Janko, Starcevic, AntonioThe ClustScan program package architecture // Book of Abstracts - KDSA 2008, Workshop on Knowledge Discovery in Scientific Applications / Gamberger, Dragan (ur.).
Zagreb: Institut Ruđer Bošković, 2008. (predavanje, sažetak, ostalo) -
50.Vukelić, AnaFinding regions of exact identity between two DNA sequences // Book of Abstracts - KDSA 2008, Workshop on Knowledge Discovery in Scientific Applications / Gamberger, Dragan (ur.).
Zagreb: Institut Ruđer Bošković, 2008. (predavanje, sažetak, znanstveni)
