Pregled po projektu: Energetskom kompeticijom uvjetovani oblici i strukture nanometarskih sustava (MB: MZOS-035-0352828-2837)
Pronađeno 60 radova
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1.Marion, Sanjin; Šiber, AntonioEjecting phage DNA against cellular turgor pressure // Biophysical journal, 107 (2014), 8; 1924-1929 doi:10.1016/j.bpj.2014.09.002 (međunarodna recenzija, članak, znanstveni)
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2.Marion, Sanjin; Šiber, AntonioModeling DNA in viral capsids: liquid crystal with bending // 8th Christmas Biophysics Workshop : Book of Abstracts / Ziherl, Primož ; Krajnc, Matej (ur.).
Ljubljana: Jožef Stefan Institute, 2013. str. 35-34 (predavanje, sažetak, znanstveni) -
3.Šiber, AntonioNon-toroidal conformations of DNA condensed in spherical confinement // 8th Christmas Biophysics Workshop : Book of Abstracts / Ziherl, Primož ; Krajnc, Matej (ur.).
Ljubljana: Jožef Stefan Institute, 2013. str. 37-37 (predavanje, sažetak, znanstveni) -
4.Marion, SanjinKorak prema pametnijim staklima, 2013. (podatak o recenziji nije dostupan, popularni rad).
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5.Popović, Marko; Šiber, AntonioLattice-gas Poisson-Boltzmann approach for sterically asymmetric electrolytes // Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 88 (2013), 022302-1 doi:10.1103/PhysRevE.88.022302 (međunarodna recenzija, članak, znanstveni)
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6.Šiber, Antonio; Ziherl, PrimožMany-body contact repulsion of deformable disks // Physics of Complex Colloids Book of Abstracts / Ziherl, Primož (ur.).
Ljubljana, 2013. str. 187-187 (poster, međunarodna recenzija, sažetak, znanstveni) -
7.Šiber, Antonio; Ziherl, PrimožMany-Body Contact Repulsion of Deformable Disks // Physical Review Letters, 110 (2013), 214301-1 doi:10.1103/PhysRevLett.110.214301 (međunarodna recenzija, članak, znanstveni)
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8.Šiber, AntonioSome physics of viruses and the grand questions still unanswered, 2013. (podatak o recenziji nije dostupan, audio/video zapis).
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9.Lošdorfer Božič, Anže; Šiber, Antonio; Podgornik, RudolfStatistical analysis of sizes and shapes of virus capsids and their resulting elastic properties // Journal of biological physics, 39 (2013), 215-228 doi:10.1007/s10867-013-9302-3 (međunarodna recenzija, članak, znanstveni)
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10.Šiber, AntonioAre electrostatic and elastic properties of viruses tuned by evolution and how? // II Reunion BioFiViNet / de Pablo, Pedro (ur.).
Madrid, 2013. str. 20-20 (plenarno, sažetak, znanstveni) -
11.Krešić, IvorSterički modificirana Poisson-Boltzmannova jednadžba, 2013., diplomski rad, diplomski, Prirodoslovno-matematički fakultet, Zagreb
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12.Marelja, MarkoSimulacija ne-sfernih zrcala i anamorfnih slika metodom praćenja svjetlosnih zraka, 2012., diplomski rad, diplomski, Prirodoslovno-matematički fakultet, Fakultet za fiziku, Zagreb
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13.Popović, Marko; Šiber, AntonioPoisson-Boltzmann approach for sterically asymmetric electrolytes // 7th Christmas Biophysics Workshop : Book of Abstracts / Pabst, Georg ; Heftberger, Peter ; Kollmitzer, Benjamin (ur.).
Graz, 2012. str. 6-6 (predavanje, sažetak, znanstveni) -
14.Šiber, Antonio; Ziherl, PrimožMany-body contact repulsion of deformable disks // 7th Christmas Biophysics Workshop : Book of Abstracts / Pabst, Georg ; Heftberger, Peter ; Kollmitzer, Benjamin (ur.).
Graz, 2012. str. 6-6 (predavanje, sažetak, znanstveni) -
15.Šiber, AntonioMean-field electrostatics explained through application to viruses // Biomolecular complexes and assemblies : book of abstracts / Hozić, Amela ; Vuletić, Tomislav (ur.).
Zagreb: Ruđer Bošković Institute, Croatian Biophysical Society, 2012. str. 59-59 (predavanje, sažetak, ostalo) -
16.Šiber, Antonio; Lošdorfer Božič, Anže; Podgornik, RudolfImportance of electrostatic interactions for virus assembly and structure // Workshop on Physical Virology, ICTP
Trst, Italija, 2012. (pozvano predavanje, međunarodna recenzija, sažetak, znanstveni) -
17.Šiber, AntonioViruses as self-assembled nanoparticles // Nanobiotechnology Workshop, JRC Ispra 2012
Ispra, Italija, 2012. (pozvano predavanje, sažetak, znanstveni) -
18.Lošdorfer Božič, Anže; Šiber, Antonio; Podgornik, RudiHow simple can a model of an empty viral capsid be? Charge distributions in viral capsids // JOURNAL OF BIOLOGICAL PHYSICS, 38 (2012), 4; 657-671 doi:10.1007/s10867-012-9278-4 (međunarodna recenzija, članak, znanstveni)
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19.Šiber, AntonioMolekularna biofizika
Zagreb: Antonio Šiber, 2012 -
20.Šiber, AntonioCondensed DNA toroids in bacteriophage capsids // From Solid State To BioPhysics VI
Cavtat, Hrvatska, 2012. (plenarno, sažetak, znanstveni) -
21.Šiber, Antonio; Lošdorfer Božič, Anže; Podgornik, RudolfCharge distributions and electrostatic interactions in viruses // New Challenges in Electrostatics of Soft and Disordered Matter
Toulouse, Francuska, 2012. (pozvano predavanje, sažetak, znanstveni) -
22.Šiber, AntonioCover page of Phys.Chem.Chem.Phys 14(11), 2012, 2012. (podatak o recenziji nije dostupan, ostalo).
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23.Šiber, Antonio; Lošdorfer Božič, Anže; Podgornik, RudolfEnergies and pressures in viruses: contribution of nonspecific electrostatic interactions // Physical chemistry chemical physics, 14 (2012), 11; 3697-4012 doi:10.1039/C1CP22756D (međunarodna recenzija, članak, znanstveni)
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24.Šiber, AntonioIn viro DNA condensation in the extended Ubbink-Odijk model // 6th Christmas Biophysics Workshop: Book of Abstracts / Šiber, Antonio (ur.).
Zagreb, 2011. str. 18-18 (predavanje, sažetak, znanstveni) -
25.Paun, BrunoIstraživanje kaustike metodom praćenja svjetlosnih zraka i usporedba s eksperimentom, 2011., diplomski rad, diplomski, Prirodoslovno-matematički fakultet, Zagreb
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26.Buča, BerislavElementi teorije stohastičkih procesa u biofizici i ekonofizici, 2011., diplomski rad, diplomski, Prirodoslovno-matematički fakultet, Fakultet za fiziku, Zagreb
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27.Šiber, Antonio; Buljan, HrvojeTheoretical and experimental analysis of a thin elastic cylindrical tube acting as a non-Hookean spring // Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 83 (2011), 6; 067601-1 doi:10.1103/PhysRevE.83.067601 (međunarodna recenzija, članak, znanstveni)
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28.Leforestier, Amelie; Šiber, Antonio; Livolant, Francoise; Podgornik, RudolfProtein-DNA Interactions Determine the Shapes of DNA Toroids Condensed in Virus Capsids // Biophysical journal, 100 (2011), 9; 2209-2216 doi:10.1016/j.bpj.2011.03.012 (međunarodna recenzija, članak, znanstveni)
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29.Lošdorfer Božič, Anže; Šiber, Antonio; Podgornik, RudolfElectrostatic self-energy of a partially formed spherical shell in salt solution: Application to stability of tethered and fluid shells as models for viruses and vesicles // Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 83 (2011), 4; 041916 -1 doi:10.1103/PhysRevE.83.041916 (međunarodna recenzija, članak, znanstveni)
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30.Šiber, AntonioTheoretical and experimental analysis of a thin elastic cylindrical tube acting as a non-Hookean spring // 5th Christmas Biophysics Workshop: Book of Abstracts / Hočevar, Ana ; Ziherl, Primož (ur.).
Ljubljana, 2010. str. 13-13 (predavanje, sažetak, znanstveni) -
31.Kunštek, KristijanReprezentacija učinka kompleksnih optičkih elemenata metodom praćenja zraka, 2010., diplomski rad, diplomski, Prirodoslovno matematički fakultet, Zagreb
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32.Šiber, AntonioInteractions governing virus self-assembly // Regional Biophysics Conference 2010 Book of Abstracts / Bojan Žagrović (ur.).
Primošten, Hrvatska, 2010. str. 8-8 (pozvano predavanje, sažetak, znanstveni) -
33.Šiber, Antonio; Zandi, Roya; Podgornik, RudolfThermodynamics of nanospheres encapsulated in virus capsids // Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 81 (2010), 051919-1 doi:10.1103/PhysRevE.81.051919 (međunarodna recenzija, članak, znanstveni)
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34.Šiber, Antonio; Rajter, R. F.; French, R. H.; Ching, W. Y.; Parsegian, V. A.; Podgornik, Rudolf: Dispersion interaction of a single-walled carbon nanotube with a substrate // Journal of Vacuum Science and Technology B: Microelectronics and Nanometer Structures, 28 (2010), 3; C4A17-C4A24 doi:10.1116/1.3416904 (međunarodna recenzija, članak, znanstveni)
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35.Šiber, Antonio; Zandi, Roya; Podgornik, RudolfThermodynamics of nanospheres encapsulated in virus capsids // 4th Christmas Biophysics Workshop, Soft Matter meets Biological Physics / Georg Pabst (ur.).
Graz, 2009. str. 14-14 (predavanje, sažetak, znanstveni) -
36.Šiber, Antonio; Rajter, R. F.; French, R. H.; Ching, W. Y.; Parsegian, V. A.; Podgornik, RudolfDispersion interactions between optically anisotropic cylinders at all separations: Retardation effects for insulating and semiconducting single-wall carbon nanotubes // Physical Review B - Condensed Matter and Materials Physics, 80 (2009), 16; 165414-1 doi:10.1103/PhysRevB.80.165414 (međunarodna recenzija, članak, znanstveni)
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37.Šiber, Antonio; Majdandžić, AntonioSpontaneous curvature as a regulator of the size of virus capsids // Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 80 (2009), 2; 021910-1 doi:10.1103/PhysRevE.80.021910 (međunarodna recenzija, članak, znanstveni)
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38.Šiber, AntonioFizika (i ponešto matematike, kemije i biologije) virusa // Matematičko-fizički list, 3 (2009), 147-155 (podatak o recenziji nije dostupan, pregledni rad, ostalo)
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39.Šiber, Antonio; Podgornik, RudolfStability of elastic icosadeltahedral shells under uniform external pressure: Application to viruses under osmotic pressure // Physical Review E, 79 (2009), Part 1; 011919-1 doi:10.1103/PhysRevE.79.011919 (međunarodna recenzija, članak, znanstveni)
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40.Šiber, AntonioElasticity of viral capsids // International Conference and BioPhysics Summer School From Solid State to Biophysics IV / Forro, Laszlo ; Pavuna, Davor (ur.).
Lausanne: Ecole Polytechnique Federale de Lausanne, 2008. (predavanje, sažetak, znanstveni) -
41.Šiber, Antonio; Majdandžić, AntonioInfluence of energetics of protein contacts on polydispersity of assembled empty virus capsids in thermodynamical equilibrium // 3rd Christmas Biophysics Workshop: Organized Molecular Systems / Vuletić, Tomislav (ur.).
Zagreb, 2008. (predavanje, sažetak, znanstveni) -
42.Šiber, Antonio; Podgornik, RudolfNonspecific interactions in spontaneous assembly of empty versus functional single-stranded RNA viruses // Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 78 (2008), 5 Part 1; 051915-1 doi:10.1103/PhysRevE.78.051915 (međunarodna recenzija, članak, znanstveni)
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43.Gumhalter, Branko; Šiber, Antonio; Buljan, Hrvoje; Fauster, ThomasNonadiabatic dynamics of electron scattering from adsorbates in surface bands // Physical Review B - Condensed Matter and Materials Physics, 78 (2008), 15; 155410-1 doi:10.1103/PhysRevB.78.155410 (međunarodna recenzija, članak, znanstveni)
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44.Šiber, AntonioIlustracija za naslovnu stranicu Soft Matter 4 (10), 2008., 2008. (podatak o recenziji nije dostupan, ostalo).
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45.Šiber, Antonio; Dragar, Miran; Parsegian, V. Adrian; Podgornik, RudolfFrom bulk to encapsidated DNA: energetics and density of DNA packed in bacteriophage capsids // Europhysics news, 39 (2008), 4; 22-22 (podatak o recenziji nije dostupan, kratko priopcenje, ostalo)
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46.Šiber, Antonio; Dragar, Miran; Parsegian, V. Adrian; Podgornik, RudolfPacking nanomechanics of viral genomes // European Physical Journal E, 26 (2008), 3; 317-325 doi:10.1140/epje/i2008-10330-7 (međunarodna recenzija, članak, znanstveni)
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47.Šiber, Antonio; Gumhalter, BrankoPhonon-mediated bound state resonances in inelastic atom– surface scattering // Journal of Physics: Condensed Matter, 20 (2008), 22; 224002-1 doi:10.1088/0953-8984/20/22/224002 (međunarodna recenzija, članak, znanstveni)
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48.Šiber, AntonioIcosadeltahedral geometry of fullerenes, viruses and geodesic domes, 2007. (podatak o recenziji nije dostupan, popularni rad).
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49.Šiber, AntonioCollapse of elastic icosadeltahedral shells under external pressure // II Christmas Biophysics Workshop
Bled, Slovenija, 2007. (predavanje, neobjavljeni rad, znanstveni) -
50.Šiber, Antonio; Podgornik, RudolfRole of electrostatic interactions in the assembly of empty spherical viral capsids // Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics, 76 (2007), 6 Part 1; 061906-1 (međunarodna recenzija, članak, znanstveni)
