Pregled po projektu: Istraživanje razvoja, diferencijacije i evolucije životinja kroz genomiku bazalnih metazoa (BAMGEN) (MB: HRZZ-IP-2014-09-6400)
Pronađeno 40 radova
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1.(The ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium) Li, Constance H.; PCAWG Tumour Subtypes and Clinical Translation; Prokopec, Stephenie D.; Sun, Ren X.; Yousif, Fouad; Schmitz, Nathaniel; Boutros, Paul C.; PCAWG ConsortiumSex differences in oncogenic mutational processes // Nature communications, 11 (2020), 1; 1-24 doi:10.1038/s41467-020-17359-2 (međunarodna recenzija, članak, znanstveni)
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2.(The ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium) Bailey, Matthew H.; MC3 Working Group; Meyerson, William U.; Dursi, Lewis Jonathan; Wang, Liang- Bo; Dong, Guanlan; Liang, Wen-Wei; Weerasinghe, Amila; Li, Shantao; Li, Yize et al.Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples // Nature communications, 11 (2020), 1; 1-27 doi:10.1038/s41467-020-18151-y (međunarodna recenzija, članak, znanstveni)
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3.(The ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium) The ICGC/TCGA Pan-Cancer Analysis of Whole Genomes ConsortiumPan-cancer analysis of whole genomes // Nature, 578 (2020), 7793; 82-93 doi:10.1038/s41586-020-1969-6 (međunarodna recenzija, članak, znanstveni)
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4.Jiao, Wei; Atwal, Gurnit; Polak, Paz; Karlic, Rosa; Cuppen, Edwin; PCAWG Tumor Subtypes and Clinical Translation Working Group; Danyi, Alexandra; de Ridder, Jeroen; van Herpen, Carla; Lolkema, Martijn P. et al.A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns // Nature communications, 11 (2020), 1; 1-12 doi:10.1038/s41467-019-13825-8 (međunarodna recenzija, članak, znanstveni)
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5.Kuzman, Maja; Terkper Ahuno, Samuel; Nogiec, Christopher; Vlahoviček, Kristian; Polak, Paz; Karlić, RosaCell-type deconvolution from cell-free DNA fragmentaton patterns // Liquid Biopsies
Virtual Event, Worldwide, 2020. str. 1-1 (poster, međunarodna recenzija, sažetak, ostalo) -
6.Jiao, Wei; Atwal, Gurnit; Polak, Paz; Karlic, Rosa; Cuppen, Edwin; Danyi, Alexandra; de Ridder, Jeoren; van Herpen, Carla; Lolkema, Martijm; Steeghs, Neeltje et al.A deep learning system can accurately classify primary and metastatic cancers based on patterns of passenger mutations // ISMB/ECCB 2019
Basel, Švicarska, 2019. (poster, međunarodna recenzija, neobjavljeni rad, znanstveni) -
7.Kubler, Kirsten; Karlic, Rosa; Haradhvala, Nicholas J.; Ha, Kyungsik; Kim, Jaegil; Kuzman, Maja; Jiao, Wei; Gakkhar, Sitanshu; Mouw, Kent W.; Braunstein, Lior Z. et al.Abstract 2727: The premalignant state captured in the landscape of somatic mutations can reveal the cancer cell-of-origin // Proceedings: AACR Annual Meeting 2019 ; Cancer Res 2019 ; 79(13 Suppl)
Atlanta (GA), Sjedinjene Američke Države: American Association for Cancer Research, 2019. 2727, 1 doi:10.1158/1538-7445.am2019-2727 (poster, međunarodna recenzija, sažetak, znanstveni) -
8.Karlić, RosaMutational Landscapes of Cancer Genomes Serve as Records of Early Malignant Transformation // NGS School 2019: Machine Learning for Biomedicine
Białobrzegi, Poljska, 2019. (pozvano predavanje, neobjavljeni rad, znanstveni) -
9.Karlić, RosaOd bioinformatike do personalizirane medicine // SRCE Dani E-infrastrukture
Zagreb, Hrvatska, 2019. (pozvano predavanje, neobjavljeni rad, znanstveni) -
10.Zonjić, IvaIdentifikacija, kloniranje i ekspresija gena myc iz spužve Eunapius subterraneus Nastava kemije i elektroforeza, 2019., diplomski rad, diplomski, Prirodoslovno-matematički fakultet, Zagreb
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11.Silvestar Beljan, Mirna Halasz, Martina Radić, Maja Herak Bosnar, Petra Mikolčević, Kristian Vlahoviček, Helena ĆetkovićCharacterization of sponge homologs of human metastasis suppressors CSTA and DRG1 // HDBMB2019, Crossroads in Life Sciences / Katalinić, Maja ; Dulić, Morana ; Stuparević, Igor (ur.).
Zagreb: Hrvatsko Društvo za Biotehnologiju, 2019. str. 69-69 (poster, domaća recenzija, sažetak, znanstveni) -
12.Beljan, Silvestar; Halasz, Mirna; Zonjić, Iva; Radić, Martina; Herak Bosnar, Maja; Mikolčević, Petra; Vlahoviček, Kristian; Ćetković, HelenaEvolutionary background of human cancer-associated genes explained by sponges // HDBMB2019, Crossroads in Life Sciences / Katalinić, Maja ; Dulić, Morana ; Stuparević, Igor (ur.).
Zagreb: Hrvatsko Društvo za Biotehnologiju, 2019. str. 87-87 (poster, domaća recenzija, sažetak, znanstveni) -
13.Lucic, Bojana; Chen, Heng-Chang; Kuzman, Maja; Zorita, Eduard; Wegner, Julia; Minneker, Vera; Wang, Wei; Fronza, Raffaele; Laufs, Stefanie; Schmidt, Manfred et al.Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration // Nature Communications, 10 (2019), 1; 4059, 12 doi:10.1038/s41467-019-12046-3 (međunarodna recenzija, članak, znanstveni)
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14.Perina, Dragutin; Korolija, Marina; Mikoč, Andreja; Halasz, Mirna; Popović-Hadžija, Marijana; Gregorović, Gordana; Ćetković, HelenaSNORA62 inhibits cell growth and proliferation in vitro // Novo doba farmacije - spremni na izazove ; New Pharmacy Era - Ready for Challenges
Dubrovnik, Hrvatska, 2019. str. 149-149 (poster, podatak o recenziji nije dostupan, sažetak, znanstveni) -
15.Kübler, Kirsten; Karlic, Rosa; Ellisen, Leif W; Foulkes, William D; Polak, Paz; Getz, GadThe cell subtype of origin and not the tumor- promoting event is critical for the formation of breast cancer subtypes // Geburtshilfe und Frauenheilkunde 78(10)
Berlin, Njemačka: Georg Thieme Verlag, 2018. str. 244-244 doi:10.1055/s-0038-1671500 (poster, međunarodna recenzija, sažetak, znanstveni) -
16.Polak, Paz; Karlic, Rosa; Kubler, Kirsten; Foulkes, William D.; Getz, GadThe mutation landscape of cancers serves as a record of early malignant transformation // Proceedings of the American Association for Cancer Research AACR Annual Meeting 2018 ; Cancer Res 2018 ; 78(13 Suppl)
Chicago (IL), Sjedinjene Američke Države: American Association for Cancer Research, 2018. str. 3304-3304 (poster, međunarodna recenzija, sažetak, znanstveni) -
17.Karlić, Rosa; Kübler, Kirsten, Foulkes, William D; Polak, Paz; Getz, GadThe Mutational Landscapes of Cancers Serve as Records of Early Malignant Transformation // Libri Oncologici : Croatian Journal of Oncology, Translating Science of Medicine - Targets and Therapeutics - Fifth Meeting of the Croatian Association for Cancer Research with International Participation / Ozretić, Petar ; Levanat, Sonja (ur.).
Zagreb: Klinika za tumore, Klinički bolnički centar Sestre milosrdnice, Ilica 197, 10 000 Zagreb, 2018. str. 11-11 (pozvano predavanje, recenziran, sažetak, znanstveni) -
18.Herak Bosnar, Maja; Perina, Drago; Harcet, Matija; Mikoč, Andreja; Bago, Ružica; Deželjin, Martina; Ćetković, HelenaNME/NM23/NDPK from unicellular eukaryotes to humans // FEBS3+ Conference: From Molecules to Living Systems : Final Programme & Book of Abstracts / Szuts, David ; Buday, Laszlo (ur.).
Veszprém: OOK-Press, 2018. str. 53-53 (pozvano predavanje, međunarodna recenzija, sažetak, znanstveni) -
19.Jelić Matošević, ZoeRačunalna optimizacija sljedova genomske DNA spužve Eunapius subterraneus sekvenciranih tehnologijom nanopora, 2018., diplomski rad, diplomski, Prirodoslovno-matematički fakultet, Zagreb
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20.Glavaš, DunjaSekvenciranje tehnologijom nanopora i sklapanje genoma ogulinske špiljske spužvice Eunapius subterraneus, 2018., diplomski rad, diplomski, Prirodoslovno-matematički fakultet, Zagreb
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21.Elek, Anamaria; Kuzman, Maja; Vlahoviček, KristiancoRdon: Codon Usage Analysis and Prediction of Gene Expressivity, 2018. doi:10.18129/B9.bioc.coRdon (međunarodna recenzija, računalni programski paket).
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22.Herak Bosnar, Maja; Radić, Martina; Ćetković, HelenaA young researcher’s guide to NME/Nm23/NDP Kinase // Periodicum biologorum, 120 (2018), 1; 3-9 doi:10.18054/pb.v120i1.6229 (međunarodna recenzija, pregledni rad, znanstveni)
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23.Ćetković, Helena; Harcet, Matija; Roller, Maša; Herak Bosnar, MajaA survey of metastasis suppressors in Metazoa // Laboratory investigation, 98 (2018), 554-570 doi:10.1038/s41374-018-0024-9 (međunarodna recenzija, članak, znanstveni)
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24.Wardell, Christopher P.; Fujita, Masashi; Yamada, Toru; Simbolo, Michele; Fassan, Matteo; Karlić, Rosa; Polak, Paz; Kim, Jaegil; Hatanaka, Yutaka; Maejima, Kazuhiro et al.Genomic characterization of biliary tract cancers identifies driver genes and predisposing mutations // Journal of hepatology, 68 (2018), 5; 959-969 doi:10.1016/j.jhep.2018.01.009 (međunarodna recenzija, članak, znanstveni)
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25.Ćetković, Helena; Halasz, Mirna; Herak Bosnar, MajaSponges: A Reservoir of Genes Implicated in Human Cancer // Marine drugs, 16 (2018), 1; 20, 17 doi:10.3390/md16010020 (međunarodna recenzija, pregledni rad, znanstveni)
