Pregled po CROSBI profilu: Ivana Mihalek (CROSBI Profil: 38087)
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1.Mihalek, IvanaIndel game
Rijeka: (bez nakladnika), 2021 -
2.Mihalek, IvanaMetode visoke propusnosti u medicinskoj dijagnostici 2021
Rijeka: (bez nakladnika), 2021 -
3.Oršolić, Ines; Bursać, Slađana; Jurada, Deana; Drmić Hofman, Irena; Dembić, Zlatko; Bartek, Jiri; Mihalek, Ivana; Volarević, SinišaCancer-associated mutations in the ribosomal protein L5 gene dysregulate the HDM2/p53-mediated ribosome biogenesis checkpoint // Oncogene, 39 (2020), 3443-3457 doi:10.1038/s41388-020-1231-6 (međunarodna recenzija, članak, znanstveni)
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4.Mihalek, IvanaHigh throughput methods in medical diagnostics 2019
Rijeka: (bez nakladnika), 2019 -
5.Mihalek, IvanaExome dashoard: emulator platforme za analizu exoma u dijagnostici rijetkih genetskih bolesti
Rijeka: (bez nakladnika), 2019 -
6.Kelly, McKenna; Park, Meredith; Mihalek, Ivana; Rochtus, Anne; Gramm, Marie; Pérez-Palma, Eduardo; Axeen, Erika Takle; Hung, Christina Y.; Olson, Heather; Swanson, Lindsay et al.Spectrum of neurodevelopmental disease associated with the GNAO1 guanosine triphosphate-binding region // Epilepsia, 60 (2019), 3; 406-418 doi:10.1111/epi.14653 (međunarodna recenzija, članak, znanstveni)
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7.Hung, Christina Y.; Rodriguez, Mario; Roberts, Abra; Bauer, Mislen; Mihalek, Ivana; Bodamer, OlafA novel FAM20C mutation causes a rare form of neonatal lethal Raine syndrome // American Journal of Medical Genetics Part A, 179 (2019), 1866-1871 doi:10.1002/ajmg.a.61291 (međunarodna recenzija, članak, znanstveni)
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8.Mihalek, IvanaGunshot sequencing game
Rijeka: (bez nakladnika), 2018 -
9.Nelson, Nya D.; Dodson, Lois M.; Escudero, Laura; Sukumar, Ann T.; Williams, Christopher L.; Mihalek, Ivana; Baldan, Alessandro; Baird, Duncan M.; Bertuch, Alison A.The C-terminal extension unique to the long isoform of the shelterin component TIN2 enhances its interaction with TRF2 in a phosphorylation- and dyskeratosis congenita cluster-dependent fashion // Molecular and cellular biology, 38 (2018), 12; e00025, 18 doi:10.1128/mcb.00025-18 (međunarodna recenzija, članak, znanstveni)
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10.Mihalek, Ivana; Bodamer, OlafEstimating incidence of inborn errors of metabolism from the frequency of variants in general population. // American Society of Human Genetics 67thAnnual Meeting
Orlando (FL), Sjedinjene Američke Države, 2017. str. 473-473 (poster, međunarodna recenzija, sažetak, znanstveni) -
11.Hung, Christina Y.; Volkmar, Barbara; Baker, James D.; Bauer, Johann W.; Gussoni, Emanuela; Hainzl, Stefan; Klausegger, Alfred; Lorenzo, Jose; Mihalek, Ivana; Rittinger, Olaf et al.A defect in the inner kinetochore protein CENPT causes a new syndrome of severe growth failure // PLOS ONE, 12 (2017), 12; 0189324, 17 doi:10.1371/journal.pone.0189324 (međunarodna recenzija, članak, znanstveni)
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12.Rohanizadegan, Mersedeh; Abdo, Sara M.; O'Donnell-Luria, Anne; Mihalek, Ivana; Chen, Peggy; Sanders, Marilyn; Leeman, Kristen; Cho, Megan; Hung, Christina; Bodamer, OlafUtility of rapid whole-exome sequencing in the diagnosis of Niemann–Pick disease type C presenting with fetal hydrops and acute liver failure // Molecular Case Studies, 3 (2017), 6; a00214, 10 doi:10.1101/mcs.a002147 (međunarodna recenzija, članak, znanstveni)
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13.Mihalek, Ivana; Waugh, Jeff L.; Park, Meredith; Kayani, Saima; Poduri, Annapurna; Bodamer, OlafMolecular map of GNAO1-related disease phenotypes and reactions to therapy, 2017. doi:10.1101/232058 (rukopis).
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14.Koenighofer, M.; Hung, C. Y.; McCauley, J. L.; Dallman, J.; Back, E. J.; Mihalek, I.; Gripp, K. W.; Sol-Church, K.; Rusconi, P.; Zhang, Z. et al.Mutations inRIT1cause Noonan syndrome - additional functional evidence and expanding the clinical phenotype // Clinical Genetics, 89 (2015), 3; 359-366 doi:10.1111/cge.12608 (međunarodna recenzija, članak, znanstveni)
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15.Krishnamurthy, Srinath; Moorthy, Balakrishnan Shenbaga; Xin Xiang, Lim; Xin Shan, Lim; Bharatham, Kavitha; Tulsian, Nikhil Kumar; Mihalek, Ivana; Anand, Ganesh S.Active Site Coupling in PDE:PKA Complexes Promotes Resetting of Mammalian cAMP Signaling // Biophysical Journal, 107 (2014), 6; 1426-1440 doi:10.1016/j.bpj.2014.07.050 (međunarodna recenzija, članak, znanstveni)
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16.Khoo, Aik-Aun; Ogrizek-Tomaš, Mario; Bulović, Ana; Korpar, Matija; Gurler, Ece; Slijepčević, Ivan; Šikić, Mile; Mihalek, IvanaExoLocator—an online view into genetic makeup of vertebrate proteins // Nucleic acids research, 42 (2014), D1; 879-881 doi:10.1093/nar/gkt1164 (međunarodna recenzija, članak, znanstveni)
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17.Mihalek, IvanaExolocator - hunt for missing pieces of coding genes in full vertebrate genomes // Bioinformatics Institute Annual Meeting
Singapur, 2013. str. 8-8 (predavanje, sažetak, znanstveni) -
18.Zhang, Zong Hong; Khoo, Aik Aun; Mihalek, IvanaCube - An Online Tool for Comparison and Contrasting of Protein Sequences // PLoS ONE, 8 (2013), 11; e79480, 5 doi:10.1371/journal.pone.0079480 (međunarodna recenzija, članak, znanstveni)
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19.Ribes-Zamora, Albert; Indiviglio, Sandra M.; Mihalek, Ivana; Williams, Christopher L.; Bertuch, Alison A.TRF2 Interaction with Ku Heterotetramerization Interface Gives Insight into c-NHEJ Prevention at Human Telomeres // Cell Reports, 5 (2013), 1; 194-206 doi:10.1016/j.celrep.2013.08.040 (međunarodna recenzija, članak, znanstveni)
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20.Mihalek IvanaHydrogen exchange mass spectrometry, molecular dynamics, and bioinformatics in the elucidation of protein dynamics and interactions // Bioinformatics Institute Annual Meeting
Singapur, 2012. str. 1-1 (predavanje, sažetak, znanstveni) -
21.Morava, E.; Vodopiutz, J.; Lefeber, D. J.; Janecke, A. R.; Schmidt, W. M.; Lechner, S.; Item, C. B.; Sykut-Cegielska, J.; Adamowicz, M.; Wierzba, J. et al.Defining the Phenotype in Congenital Disorder of Glycosylation Due to ALG1 Mutations // PEDIATRICS, 130 (2012), 4; e1034-e1039 doi:10.1542/peds.2011-2711 (međunarodna recenzija, članak, znanstveni)
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22.Mihalek, IvanaProtein structure comparison: from substructure to dynamics - deconSTRUCT server // Bioinformatics Insitute Annual Meeting
Singapur, 2011. str. 1-1 (predavanje, sažetak, znanstveni) -
23.Bharatham, Kavitha; Zhang, Zong Hong; Mihalek, IvanaDeterminants, Discriminants, Conserved Residues - A Heuristic Approach to Detection of Functional Divergence in Protein Families // PLoS ONE, 6 (2011), 9; e24382, 10 doi:10.1371/journal.pone.0024382 (međunarodna recenzija, članak, znanstveni)
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24.Zhang, Zong Hong; Bharatham, Kavitha; Chee, Sharon M. Q.; Mihalek, IvanaCube-DB: detection of functional divergence in human protein families // Nucleic Acids Research, 40 (2011), D1; D490-D494 doi:10.1093/nar/gkr1129 (međunarodna recenzija, članak, znanstveni)
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25.Zhang, Zong Hong; Bharatham, Kavitha; Sherman, Westley A.; Mihalek, IvanadeconSTRUCT: general purpose protein database search on the substructure level // Nucleic Acids Research, 38 (2010), suppl_2; W590-W594 doi:10.1093/nar/gkq489 (međunarodna recenzija, članak, znanstveni)
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26.Coombs, G. S.; Yu, J.; Canning, C. A.; Veltri, C. A.; Covey, T. M.; Cheong, J. K.; Utomo, V.; Banerjee, N.; Zhang, Z. H.; Jadulco, R. C. et al.WLS-dependent secretion of WNT3A requires Ser209 acylation and vacuolar acidification // Journal of Cell Science, 123 (2010), 19; 3357-3367 doi:10.1242/jcs.072132 (međunarodna recenzija, članak, znanstveni)
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27.Wang, Hui; Chumnarnsilpa, Sakesit; Loonchanta, Anantasak; Li, Qiang; Kuan, Yang-Mei; Robine, Sylvie; Larsson, Mårten; Mihalek, Ivana; Burtnick, Leslie D.; Robinson, Robert C.Helix Straightening as an Activation Mechanism in the Gelsolin Superfamily of Actin Regulatory Proteins // Journal of Biological Chemistry, 284 (2009), 32; 21265-21269 doi:10.1074/jbc.m109.019760 (međunarodna recenzija, članak, znanstveni)
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28.Zhang, Zong Hong; Lee, Hwee Kuan; Mihalek, IvanaReduced representation of protein structure for fast comparison and database search // Bioinformatics Institute Singapore Annual Meeting
Singapur, 2008. 155, 12 (predavanje, međunarodna recenzija, sažetak, znanstveni) -
29.Mihalek, IvanaBlueprint for an Algorithm for Conformational Transformation Tolerant Search Through a Database of Protein Structures // International Conference on Bioinformatics & Computational Biology, BIOCOMP 2008
Las Vegas (NV), Sjedinjene Američke Države, 2008. str. 653-659 (predavanje, recenziran, sažetak, ostalo) -
30.Nigham, A.; Tucker-Kellogg, L.; Mihalek, I.; Verma, C.; Hsu, D.pFlexAna: detecting conformational changes in remotely related proteins // Nucleic Acids Research, 36 (2008), Web Server; W246-W251 doi:10.1093/nar/gkn259 (međunarodna recenzija, članak, znanstveni)
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31.Item, Chike Bellarmine; Mihalek, Ivana; Lichtarge, Oliver; Jalan, Anil; Vodopiutz, Julia; Muhl, Adolf; Bodamer, Olaf A.Manifestation of hawkinsinuria in a patient compound heterozygous for hawkinsinuria and tyrosinemia III // Molecular Genetics and Metabolism, 91 (2007), 4; 379-383 doi:10.1016/j.ymgme.2007.04.008 (međunarodna recenzija, članak, znanstveni)
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32.Mihalek, I; Reš, I; Lichtarge, OBackground frequencies for residue variability estimates: BLOSUM revisited // BMC Bioinformatics, 8 (2007), 1; 488, 8 doi:10.1186/1471-2105-8-488 (međunarodna recenzija, članak, znanstveni)
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33.Mihalek, I.; Reš, I.; Lichtarge, O.On Itinerant Water Molecules and Detectability of Protein–Protein Interfaces through Comparative // Journal of Molecular Biology, 369 (2007), 2; 584-595 doi:10.1016/j.jmb.2007.03.057 (međunarodna recenzija, članak, znanstveni)
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34.Ribes-Zamora, Albert; Mihalek, Ivana; Lichtarge, Olivier; Bertuch, Alison ADistinct faces of the Ku heterodimer mediate DNA repair and telomeric functions // Nature Structural & Molecular Biology, 14 (2007), 4; 301-307 doi:10.1038/nsmb1214 (međunarodna recenzija, članak, ostalo)
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35.Chiba, Peter; Mihalek, Ivana; Ecker, Gerhard; Kopp, Stephan; Lichtarge, OlivierRole of Transmembrane Domain/Transmembrane Domain Interfaces of PGlycoprotein (ABCB1) in Solute Transport. Convergent Information from Photoaffinity Labeling, Site Directed Mutagenesis and in Silico Importance Prediction // Current Medicinal Chemistry, 13 (2006), 7; 793-805 doi:10.2174/092986706776055607 (međunarodna recenzija, članak, ostalo)
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36.Mihalek, I.; Reš, I.; Lichtarge, O.Evolutionary and structural feedback on selection of sequences for comparative analysis of proteins // Proteins: Structure, Function, and Bioinformatics, 63 (2006), 1; 87-99 doi:10.1002/prot.20866 (međunarodna recenzija, članak, znanstveni)
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37.Yao, Hui; Mihalek, Ivana; Lichtarge, OlivierRank information: A structure‐independent measure of evolutionary trace quality that improves identification of protein functional sites // Proteins: Structure, Function, and Bioinformatics, 65 (2006), 1; 111-123 doi:10.1002/prot.21101 (međunarodna recenzija, članak, znanstveni)
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38.Mihalek, I.; Reš, I.; Lichtarge, O.A structure and evolution-guided Monte Carlo sequence selection strategy for multiple alignment-based analysis of proteins // Bioinformatics, 22 (2006), 2; 149-156 doi:10.1093/bioinformatics/bti791 (međunarodna recenzija, članak, znanstveni)
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39.Mihalek, I.; Res, I.; Lichtarge, O.Evolutionary trace report_maker: a new type of service for comparative analysis of proteins // Bioinformatics, 22 (2006), 13; 1656-1657 doi:10.1093/bioinformatics/btl157 (međunarodna recenzija, članak, ostalo)
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40.Res, I.; Mihalek, I.; Lichtarge, O.An evolution based classifier for prediction of protein interfaces without using protein structures // Bioinformatics, 21 (2005), 10; 2496-2501 doi:10.1093/bioinformatics/bti340 (međunarodna recenzija, članak, znanstveni)
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41.Mihalek, I.; Reš, I.; Lichtarge, O.A Family of Evolution–Entropy Hybrid Methods for Ranking Protein Residues by Importance // Journal of Molecular Biology, 336 (2004), 5; 1265-1282 doi:10.1016/j.jmb.2003.12.078 (međunarodna recenzija, članak, znanstveni)
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42.Yao, H; Kristensen, DM; Mihalek, I; Sowa, ME; Shaw , C; Kimmel, M; Kavraki, L; Lichtarge, OAn accurate, sensitive, and scalable method to identify functional sites in protein structures // Journal of Molecular Biology, 326 (2003), 1; 255-261 doi:10.1016/s0022-2836(02)01336-0 (međunarodna recenzija, članak, znanstveni)
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43.Mihalek, I.; Reš, I.; Yao, H.; Lichtarge, O.Combining Inference from Evolution and Geometric Probability in Protein Structure Evaluation // Journal of Molecular Biology, 331 (2003), 1; 263-279 doi:10.1016/s0022-2836(03)00663-6 (međunarodna recenzija, članak, znanstveni)
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44.Lichtarge, Olivier; Yao, Hui; Kristensen, David M.; Madabushi, Srinivasan; Mihalek, IvanaAccurate and scalable identification of functional sites by evolutionary tracing // Journal of Structural and Functional Genomics, 4 (2003), 2/3; 159-166 doi:10.1023/a:1026115125950 (međunarodna recenzija, članak, znanstveni)
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45.Coté, René; Mihalek, Ivana; Fertig, Herbert; Brey, LuísCollective Modes of Bilayer Quantum Hall Systems in High Landau Levels: From Interlayer Coherence to Stripes // American Physical Society, Annual March Meeting
Seattle (WA), Sjedinjene Američke Države, 2001. G29.005, 1 (predavanje, međunarodna recenzija, sažetak, znanstveni) -
46.Mihalek, Ivana; Menon, MadhuStructure and stability of intermediate size SiC, BN and SiGe clusters // American Physical Society, Annual March Meeting
Seattle (WA), Sjedinjene Američke Države, 2001. Z11.009, 1 (predavanje, međunarodna recenzija, sažetak, znanstveni) -
47.Fertig, H. A.; Brey, Luis; Mihalek, Ivana; Cote, ReneStripes in Double Layer Quantum Hall Systems // American Physical Society, Annual March Meeting
Seattle (WA), Sjedinjene Američke Države, 2001. G29.004, 1 (predavanje, međunarodna recenzija, sažetak, znanstveni) -
48.Mihalek, IvanaCSPec: framework for securing concast signaling protocol., 2001., magistarski rad, Computer Science, Lexington, KY, USA
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49.Mihalek, Ivana; Fertig, HerbertSmall Skyrmions in Higher Landau Levels - a Computational Approach // American Physical Society, Annual March Meeting,
Minneapolis (MN), Sjedinjene Američke Države, 2000. G17.008, 1 (predavanje, međunarodna recenzija, sažetak, znanstveni) -
50.Mihalek, IvanaCollective excitations of multicomponent quantum Hall systems, 2000., doktorska disertacija, Odjel fizike i astronomije, Lexington, KY, USA
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51.Mihalek, Ivana; Fertig, H. A.Landau-level mixing and skyrmion stability in quantum Hall ferromagnets // Physical review. B, Condensed matter and materials physics, 62 (2000), 20; 13573-13578 doi:10.1103/physrevb.62.13573 (međunarodna recenzija, članak, znanstveni)
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52.Mihalek, Ivana; Fertig, Herbert; Straley, JosephPhase Diagram of a 2D Crystal in a Slowly Varying Random Potential: Monte Carlo Simulations // American Physical Society, Annual March Meeting
Kansas City (MO), Sjedinjene Američke Države, 1997. Q26.09, 1 (predavanje, međunarodna recenzija, sažetak, znanstveni) -
53.Mihalek, IvanaStruktura bozonsko-fermionskih stanja u jezgri 129I, diplomski rad, Prirodoslovno-matematički fakultet, Zagreb