Pregled po CROSBI profilu: Fran Supek (CROSBI Profil: 22013, MBZ: 268331)
Pronađeno 70 radova
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1.Zhou, Naihui; Jiang, Yuxiang; Bergquist, Timothy R.; Lee, Alexandra J.; Kacsoh, Balint Z.; Crocker, Alex W.; Lewis, Kimberley A.; Georghiou, George; Nguyen, Huy N.; Hamid, Md Nafiz et al.The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens // Genome Biology, 20 (2019), 1; 244, 23 doi:10.1186/s13059-019-1835-8 (međunarodna recenzija, članak, znanstveni)
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2.Mihelčić, Matej; Šmuc, Tomislav; Supek, FranPatterns of diverse gene functions in genomic neighborhoods predict gene function and phenotype // Scientific reports, 9 (2019), 1; 19537, 16 doi:10.1038/s41598-019-55984-0 (međunarodna recenzija, članak, znanstveni)
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3.Repar, Jelena; Supek, Fran; Klanjscek, Tin; Warnecke, Tobias; Zahradka, Ksenija; Zahradka, DavorGenome rearrangements in radiation-resistant bacteria // 4th Congress of Croatian Geneticists with international participation : Book of Abstracts / Šarčević, Hrvoje ; Ugarković, Đurđica ; Vujaklija, Dušica ; Svetec, Ivan Krešimir ; Svetec Miklenić, Marina (ur.).
Zagreb: Croatian Genetic Society, 2018. str. 24-24 (predavanje, recenziran, sažetak, znanstveni) -
4.Vidulin, Vedrana; Šmuc, Tomislav; Džeroski, Sašo; Supek, FranThe evolutionary signal in metagenome phyletic profiles predicts many gene functions // Microbiome, 6 (2018), 1; 129, 21 doi:10.1186/s40168-018-0506-4 (međunarodna recenzija, članak, znanstveni)
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5.Park, Solip; Supek, Fran; Lehner, BenSystematic discovery of germline cancer predisposition genes through the identification of somatic second hits // Nature Communications, 9 (2018), 1; 2601-2601 doi:10.1038/s41467-018-04900-7 (međunarodna recenzija, članak, znanstveni)
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6.Levatić, Jurica; Pavić, Kristina; Perković, Ivana; Uzelac, Lidija; Ester, Katja; Kralj, Marijeta; Kaiser, Marcel; Rottmann, Matthias; Supek, Fran; Zorc, BrankaMachine learning prioritizes synthesis of primaquine ureidoamides with high antimalarial activity and attenuated cytotoxicity // European journal of medicinal chemistry, 146 (2018), 651-667 doi:10.1016/j.ejmech.2018.01.062 (međunarodna recenzija, članak, znanstveni)
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7.Levatić, Jurica; Brbić, Maria; Stepišnik Perdih, Tomaž; Kocev, Dragi; Vidulin, Vedrana; Šmuc, Tomislav; Supek, Fran; Džeroski, SašoPhenotype prediction with semi-supervised learning // New frontiers in mining complex patterns NFMCP 2017, Lecture Notes in Computer Science
Skopje, Sjeverna Makedonija, 2017. str. 1-11 (predavanje, međunarodna recenzija, cjeloviti rad (in extenso), znanstveni) -
8.Brbić, Maria; Piškorec, Matija; Vidulin, Vedrana; Kriško, Anita; Šmuc, Tomislav; Supek, FranPhenotype Inference from Text and Genomic Data // ECML-PKDD 2017, Lecture Notes in Computer Science / Altun, Yasemin ; Das, Kamalika ; et al. (ur.).
Skopje, Sjeverna Makedonija: Springer, 2017. str. 373-377 doi:10.1007/978-3-319-71273-4_34 (predavanje, međunarodna recenzija, cjeloviti rad (in extenso), znanstveni) -
9.Supek, Fran; Lenher, BenClustered Mutation Signatures Reveal that Error-Prone DNA Repair Targets Mutations to Active Genes // Cell, 170 (2017), 3; 534-547 doi:10.1016/j.cell.2017.07.003 (međunarodna recenzija, članak, znanstveni)
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10.Zorc, Branka; Pavić, Kristina; Supek, Fran; Levatić, Jurica; Kaiser, MarcelAntimalarial screening of primaquine derivatives against erythrocytic stage of P. falciparum // Book of Abstracts of the 10th Joint Meeting on Medicinal Chemistry / Basarić , Nikola ; Namjesnik, Danijel ; Perković, Ivana ; Stepanić, Višnja (ur.).
Zagreb: Hrvatsko kemijsko društvo, 2017. str. 248-248 (poster, međunarodna recenzija, sažetak, ostalo) -
11.Pavić, Kristina; Levatić, Jurica; Supek, Fran; Zorc, BrankaQSAR based synthesis of novel primaquine ureidoamides // 25. Hrvatski skup kemičara i kemijskih inženjera s međunarodnim sudjelovanjem ; 3. simpozij Vladimir Prelog : knjiga sažetaka = 25th Croatian Meeting of Chemist and Chemical Engineers with international participation. 3rd symposium “Vladimir Prelog” : Book of Abstracts / Šantić, Ana ; Đaković, Marijana (ur.).
Zagreb: Croatian Chemical Society ; Croatian Society of Chemical Engineers, 2017. str. 200-200 (poster, domaća recenzija, sažetak, znanstveni) -
12.Repar, Jelena; Supek, Fran; Klanjšček, Tin; Warnecke, Tobias; Zahradka, Ksenija; Zahradka, DavorElevated rate of genome rearrangements in radiation-resistant bacteria // Genetics, 205 (2017), 4; 1677-1689 doi:10.1534/genetics.116.196154 (međunarodna recenzija, članak, znanstveni)
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13.Jiang, Yuxiang; Oron, Tal Ronnen; Clark, Wyatt T.; Bankapur, Asma R.; Supek, Fran; ...; Radivojac, PredragAn expanded evaluation of protein function prediction methods shows an improvement in accuracy // Genome Biology, 17 (2016), 1; 184, 19 doi:10.1186/s13059-016-1037-6 (međunarodna recenzija, članak, ostalo)
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14.Vidulin, Vedrana; Brbić, Maria; Supek, Fran; Šmuc, TomislavEvaluation of fusion approaches in large-scale bio-annotation setting // Proceedings of the 4th Workshop on Machine Learning in Life Sciences / Ksieniewicz, Pawel (ur.).
Wrocław: European Research Centre of Network Intelligence for Innovation Enhancement, 2016. str. 37-51 (predavanje, međunarodna recenzija, cjeloviti rad (in extenso), znanstveni) -
15.Supek, Fran; Škunca, NivesVisualizing GO Annotations // The Gene Ontology Handbook / Dessimoz, Christophe ; Škunca, Nives (ur.).
New York (NY): Humana Press, 2016. str. 207-220 -
16.Brbić, Maria; Piškorec, Matija; Vidulin, Vedrana; Kriško, Anita; Šmuc, Tomislav; Supek, FranThe landscape of microbial phenotypic traits and associated genes // Nucleic acids research, 44 (2016), 21; 10074-10090 doi:10.1093/nar/gkw964 (međunarodna recenzija, članak, znanstveni)
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17.Lindeboom, Rik; Supek, Fran; Lehner, BenThe rules and impact of nonsense-mediated mRNA decay in human cancers // Nature genetics, 48 (2016), 10; 1112-1118 doi:10.1038/ng.3664 (međunarodna recenzija, članak, znanstveni)
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18.Vidulin, Vedrana; Šmuc, Tomislav; Supek, FranExtensive Complementarity between Gene Function Prediction Methods // Bioinformatics, 32 (2016), 23; 3645-3653 doi:10.1093/bioinformatics/btw532 (međunarodna recenzija, članak, znanstveni)
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19.Cho, Ara; Shim, Jung Eun; Kim, Eiru; Supek, Fran; Lehner, Ben; Lee, InsukMUFFINN: cancer gene discovery via network analysis of somatic mutation data // Genome biology, 17 (2016), 129, 16 doi:10.1186/s13059-016-0989-x (međunarodna recenzija, članak, znanstveni)
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20.Supek, FranThe Code of Silence: Widespread Associations Between Synonymous Codon Biases and Gene Function // Journal of molecular evolution, 82 (2016), 1; 65-73 doi:10.1007/s00239-015-9714-8 (međunarodna recenzija, pregledni rad, znanstveni)
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21.Repar, Jelena; Supek, Fran; Zahradka, Davor; Zahradka, KsenijaEnvironmentally induced increase of rearrangement rates in radiation resistant prokaryotes // SMBE 2015 Abstract Book
Beč, Austrija, 2015. (poster, međunarodna recenzija, sažetak, znanstveni) -
22.Brbić, Maria; Warnecke, Tobias; Kriško, Anita; Supek, FranGlobal Shifts in Genome and Proteome Composition Are Very Tightly Coupled // Genome Biology and Evolution, 7 (2015), 6; 1519-1532 doi:10.1093/gbe/evv088 (međunarodna recenzija, članak, znanstveni)
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23.Supek, Fran; Lehner, BenDifferential DNA mismatch repair underlies mutation rate variation across the human genome // Nature, 521 (2015), 81-84 doi:10.1038/nature14173 (međunarodna recenzija, članak, znanstveni)
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24.Vidulin, Vedrana; Šmuc, Tomislav; Supek, FranSpeed and accuracy benchmarks of large-scale microbial gene function prediction with supervised machine learning // Discovery science : book of abstracts
Bled, Slovenija, 2014. str. 1-3 (poster, međunarodna recenzija, prošireni sažetak, znanstveni) -
25.Supek, Fran; Lehner, Ben; Hajkova, Petra; Warnecke, TobiasHydroxymethylated Cytosines Are Associated with Elevated C to G Transversion Rates // Plos genetics, 10 (2014), 9; 004585, 13 doi:10.1371/journal.pgen.1004585 (međunarodna recenzija, članak, znanstveni)
