Pregled po projektu: 0058008

1.

Hranueli, Daslav
Industrial applications of genomics, proteomics and bioinformatics // Essays in Bioinformatics / Moss, S. David ; Jelaska, Sibila ; Pongor, Sándor (ur.).
Amsterdam : Berlin : Oxford : Tokyo : Washington: IOS Press, 2005. str. 176-188

Obrazovni materijali

Ostalo

1.

Bašić-Zaninović, Tamara; Perić, Nataša
Biologija: putovanje kroz život
Zagreb: Kugler, 2004

Radovi u časopisima

Znanstveni i pregledni radovi

1.

Bošnjak, Marijan; Bago Joksović, Anita; Pigac, Jasenka; Bošnjak Cihlar, Željana; Hranueli, Daslav
Applicability of Mathematical Models in Defining the Behaviour Kinetics Distinction Among Microbial Strains // Chemical and Biochemical Engineering Quarterly, 20 (2006), 4; 375-388 (međunarodna recenzija, članak, znanstveni)
Pristup cjelovitom tekstu rada www.pbf.hr
2.

Petković, Hrvoje; Cullum, John; Hranueli, Daslav; Hunter, S. Iain; Perić-Concha, Nataša; Pigac, Jasenka; Thamchaipenet, Arinthip; Vujaklija, Dušica; Long, F. Paul
Genetics of Streptomyces rimosus, the Oxytetracycline Producer // Microbiology and Molecular Biology Reviews, 70 (2006), 3; 704-728 doi:10.1128/MMBR.00004-06 (međunarodna recenzija, pregledni rad, znanstveni)
Pristup cjelovitom tekstu rada doi mmbr.asm.org
3.

Milne, F. Bruce; Long, F. Paul; Starčević, Antonio; Hranueli, Daslav; Jaspars, Marcel
Spontaneity in the patellamide biosynthetic pathway // Organic & biomolecular chemistry, 4 (2006), 4; 631-638 (međunarodna recenzija, članak, znanstveni)
Pristup cjelovitom tekstu rada
4.

Dunlap, C. Walter; Jaspars, Marcel; Hranueli, Daslav; Battershill, N. Christopher; Perić-Concha, Nataša; Žučko, Jurica; Wright, H. Stephen; Long, F. Paul
New methods for medicinal chemistry- universal gene cloning and expression systems for production of marine bioactive metabolites // Current medicinal chemistry, 13 (2006), 6; 697-710 (međunarodna recenzija, pregledni rad, znanstveni)
Pristup cjelovitom tekstu rada
5.

Perić-Concha, Nataša; Borovička, Branko; Long Paul F.; Hranueli, Daslav; Waterman, Peter G.; Hunter, Iain S.
Ablation of the otcC gene encoding a post-polyketide hydroxylase from the oxytetracyline biosynthetic pathway in Streptomyces rimosus results in novel polyketides with altered chain length // The Journal of biological chemistry, 280 (2005), 45; 37455-37460 doi:10.1074/jbc.M503191200 (međunarodna recenzija, članak, znanstveni)
Pristup cjelovitom tekstu rada doi www.jbc.org
6.

Perić-Concha, Nataša; Castaldo, Gaetano; Long, F. Paul
Evidence for apparent gene instability in the rifamycin producing polyketide synthase: implications for combinatorial biosynthesis and heterologous gene expression // Folia microbiologica, 50 (2005), 6; 483-486 (međunarodna recenzija, članak, znanstveni)
7.

Hranueli, Daslav; Cullum, John; Basrak, Bojan; Goldstein, Pavle; Long, F. Paul
Plasticity of the Streptomyces genome - evolution and engineering of new antibiotics // Current medicinal chemistry, 12 (2005), 14; 1697-1704 doi:10.2174/0929867054367176 (međunarodna recenzija, pregledni rad, znanstveni)
Pristup cjelovitom tekstu rada doi www.eurekaselect.com
8.

Denapaite, Dalia; Paravić Radičević, Andrea; Čajavec, Branka; Hunter, Iain; Hranueli, Daslav; Cullum, John
Persistence of the Chromosome End Regions at Low Copy Number in Mutant Strains of Streptomyces rimosus and Streptomyces lividans // Food technology and biotechnology, 43 (2005), 1; 9-17 (međunarodna recenzija, članak, znanstveni)
Pristup cjelovitom tekstu rada
9.

Gathogo, W.N. Esther; Waugh, C.W. Alastair; Perić-Concha, Nataša; Redpath, B. Maria; Long, F. Paul
Rapid detection of 'rare' actinomycetes in environmental samples // Biotechnology letters, 26 (2004), 11; 897-900 (međunarodna recenzija, članak, znanstveni)
10.

Perić-Concha, Nataša; Long, F. Paul
Mining the microbial metabolome: a new frontier for natural products lead disc // Drug discovery today, 8 (2003), 23; 1078-1084 (međunarodna recenzija, članak, znanstveni)
11.

Bačun-Družina, Višnja; Džidić, Senka; Perić, Nataša; Ivančić, Mirela; Franekić Čolić, Jasna
The induction of Escherichia coli aidB gene in Salmonella typhimurium // Periodicum biologorum, 105 (2003), 3; 257-262 (međunarodna recenzija, članak, znanstveni)
12.

Gathogo, W.N. Esther, Waugh C.W. Alastair; Perić, Nataša; Redpath, B.; Maria, Long, F. Paul
Colony PCR amplification of actinomycete DNA // Journal of antibiotics, 56 (2003), 4; 423-424 (međunarodna recenzija, članak, znanstveni)
13.

Hranueli, Daslav
Where functional genomics can be applied // Perspectives : Pliva global review, 1 (2002), 1; 28-33 (podatak o recenziji nije dostupan, pregledni rad, znanstveni)
www.pliva.com
14.

Hranueli, Daslav
New technologic, economic and social challenges // Perspectives : Pliva global review, 1 (2002), 1; 6-9 (podatak o recenziji nije dostupan, pregledni rad, znanstveni)

Radovi u zbornicima skupova

Znanstveni radovi u zbornicima skupova

1.

Hranueli, Daslav; Cullum, John
Bioinformatics of Streptomyces species and food production // Current Studies of Biotechnology ; Vol. 3.: Food / Kniewald, Zlatko et al. (ur.).
Zagreb: Hrvatsko Društvo za Biotehnologiju, 2003. str. 333-340 (pozvano predavanje, međunarodna recenzija, cjeloviti rad (in extenso), znanstveni)

Sažeci sa skupova

Sažeci u zbornicima i časopisima

1.

Žučko, Jurica; ŠSkunca, Nives; Long, Paul F.; Cullum, John; Hranueli, Daslav; Adams, Michael; Kessin, Richard H.
The Dictyostelium discoideum genome and its polyketide synthase genes // International Dictyostelium Conference : Final Program and Book of Abstracts / Kuspa, Adam ; Gomer, Richard ; Sucgang, Richard (ur.).
Houston (TX): Baylor College of Medicine, 2006. str. 134-134 (poster, sažetak, znanstveni)
2.

Lesnik, Urska; Fujs, Stefan; Raspor, Peter; Hranueli, Daslav; Hunter, S. Iain; Petković, Hrvoje
Genetic engineering in S. rimosus and its effects on DNA rearrangements // Book of Abstracts / Vaclav Paces (ur.).
Prag: Academy of Sciences of the Czech Republic, 2006. str. 102-103 (P171) (poster, sažetak, znanstveni)
3.

Žučko, Jurica; Long, Paul F.; Cullum, John; Hranueli, Daslav; Kessin, Richard
Polyketide gene-clusters in the Dictyostelium discoideum genome // 10th International Symposium on the Genetics of Industrial Microorganisms : Book of Abstracts ; P018 / Paces, Vaclav (ur.).
Prag: Academy of Sciences of the Czech Republic, 2006. str. 54-54 (poster, sažetak, znanstveni)
4.

Diminic, Janko; Starcevic, Antonio; Long, F. Paul; Hranueli, Daslav; Cullum, John
System for the in silico generation of novel biologically active chemical entities // Book of Abstracts / Vaclav Paces (ur.).
Prag: Academy of Sciences of the Czech Republic, 2006. (poster, sažetak, znanstveni)
5.

Starcevic, Antonio; Cullum, John; Jaspars, Marcel; Hranueli, Daslav; Long, F. Paul
Predicting the nature and timing of epimerisation on a modular polyketide synthase // Book of Abstracts / Vaclav Paces (ur.).
Prag: Academy of Sciences of the Czech Republic, 2006. (poster, sažetak, znanstveni)
6.

Žučko, Jurica; Basrak, Bojan; Goldstein, Pavle; Hranueli, Daslav
A method for functional classification of globular proteins // Final Programme and Book of Abstracts / Franekić Čolić, Jasna ; Ugarković, Đurđica (ur.).
Zagreb: Croatian Genetic Society, 2005. str. 82 (PI-21) (poster, sažetak, znanstveni)
7.

Diminić, Janko; Zavišek, Karolina; Široka, Vilson; Radulović, Žarko; Starčević, Antonio; Hranueli, Daslav; Cullum, John
Database for PKSS and NRPSS: computer programs to automatically find and annotate new sequences // Final Programme and Book of Abstracts / Franekić Čolić, Jasna ; Ugarković, Đurđica (ur.).
Zagreb: Croatian Genetic Society, 2005. str. 69 (PI-8) (poster, sažetak, znanstveni)
8.

Starčević, Antonio; Diminić, Janko; Hranueli, Daslav; Cullum, John
Construction of a database for modular polyketides and non-ribosomal peptides // Final Programme and Book of Abstracts / Franekić Čolić, Jasna ; Ugarković, Đurđica (ur.).
Zagreb: Croatian Genetic Society, 2005. str. 68 (PI-7) (poster, sažetak, znanstveni)
9.

Cullum, John; Wolf, Kerstin; Doležal, Anamarija; Hranueli, Daslav
The use of homologous recombination for cloning secondary metabolite clusters in Streptomyces // Final Programme and Book of Abstracts / Franekić Čolić, Jasna ; Ugarković, Đurđica (ur.).
Zagreb: Croatian Genetic Society, 2005. str. 40 (PL-22) (pozvano predavanje, sažetak, znanstveni)
10.

Perić-Concha, Nataša
Ablation of a post-polyketide hydroxylase from the oxytetracyline biosynthetic pathway results in novel polyketides with altered chain length // The Chemistry and Biology of Natural Product Biosynthesis II
Bristol: Royal Society of Chemistry, U.K., 2005. (predavanje, međunarodna recenzija, sažetak, znanstveni)
11.

Goldstein, Pavle; Basrak, Bojan; Žučko, Jurica; Starčević, Antonio; Hranueli, Daslav; Long, F. Paul; Cullum, John
Hidden Markov models and function prediction for polyketide synthase domains // Program and Abstracts / Kniewald, Zlatko et al. (ur.).
Zagreb: Hrvatsko Društvo za Biotehnologiju, 2005. str. 32 (L-22) (predavanje, sažetak, znanstveni)
12.

Cullum, John; Peitz, Hansrainer; Tupath, Holger; Hranueli, Daslav
Computer modelling of recombination between modular biosynthesis clusters // Proceedings / Balenović, Mirta ; Wittner, Velimir (ur.).
Zagreb: Croatian Microbiological Society, 2004. (predavanje, sažetak, znanstveni)
13.

Hranueli, Daslav; Cullum, John
Bioinformatics of Streptomyces species and food production // Program and Abstracts / Kniewald, Zlatko et al. (ur.).
Zagreb: Hrvatsko Društvo za Biotehnologiju, 2003. str. 21 (OP-1) (predavanje, domaća recenzija, sažetak, znanstveni)
14.

Horvat, Lada-Ivana; Hranueli, Daslav; Cullum, John
Linear ends of Streptomyces rimosus replicons. // Book of Abstracts / Vladimir Mrša, Danko Hajsig (ur.).
Zagreb: Faculty of Food Technology and Biotechnology, University of Zagreb, 2002. (predavanje, domaća recenzija, sažetak, znanstveni)
15.

Paravić Radičević, Andrea; Denapaite, Dalia; Čajavec, Branka; Hunter, S. Iain; Hranueli, Daslav; Cullum, John
Are Streptomycetes a link in evolution between unicellular prokaryotes and mycelial lower eukaryotes? // Book of Abstracts / Jerka Dumić et al. (ur.).
Zagreb: Faculty of Pharmacy and Biochemistry, University of Zagreb, 2002. (predavanje, domaća recenzija, sažetak, znanstveni)

Druga sudjelovanja na skupovima

1.

Cullum, John; Horvat, Lada-Ivana; Hranueli, Daslav; Wolf, Kerstin
The use of bioinformatics in bacterial genetics // Proceedings of the 4th Croatian Congress of Food Technologists, Biotechnologists and Nutritionists (Central European Meeting) / V. Lelas et al. (ur.).
Zagreb: Faculty of Food Technology and Biotechnology, University of Zagreb, 2002. str. 285-290 (pozvano predavanje, međunarodna recenzija, cjeloviti rad (in extenso), pregledni)
2.

Hranueli, Daslav; Cullum, John
From genes to genomes and beyond // Proceedings of the 4th Croatian Congress of Food Technologists, Biotechnologists and Nutritionists (Central European Meeting) / V. Lelas et al. (ur.).
Zagreb: Faculty of Food Technology and Biotechnology, University of Zagreb, 2002. str. 278-284 (pozvano predavanje, međunarodna recenzija, cjeloviti rad (in extenso), pregledni)

Ocjenski radovi

Magistarski radovi

1.

Galić, Tatjana
Neposredna molekularna evolucija gena u bakterije Escherichia coli rekombinacijom u uvjetima in vivo, 2004., magistarski rad, Prehrambeno-biotehnološki fakultet, Zagreb

Diplomski radovi (uključujući i diplomske radove starog programa)

1.

Radulović, Žarko
Razvoj računalnih programa za automatsko pronalaženje modula i domena poliketid sintetaza, 2006., diplomski rad, Prehrambeno-biotehnološki fakultet, Zagreb
2.

Škunca, Nives
Analiza gena PKS u genomu amebe Dictyostelium discoideum, 2006., diplomski rad, Prehrambeno-biotehnološki fakultet, Zagreb
3.

Široka, Vilson
Razvoj računalnih programa za automatsko pronalaženje modula i domena neribosomalnih peptid sintetaza, 2005., diplomski rad, Prehrambeno-biotehnološki fakultet, Zagreb
4.

Žučko, Jurica
Predviđanje funkcija domena poliketid sintetaza primjenom skrivenih Markovljevih modela, 2005., diplomski rad, Prehrambeno-biotehnološki fakultet, Zagreb
5.

Zavišek, Karolina
Razvoj računalnih programa za automatsko pronalaženje novih sekvencija sintetaza poliketida i neribosomskih peptida, 2005., diplomski rad, Prehrambeno-biotehnološki fakultet, Zagreb
6.

Starčević, Antonio
Konstrukcija baze podataka za modularne poliketide i neribosomske peptide, 2004., diplomski rad, Prehrambeno-biotehnološki fakultet, Zagreb