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Pregled bibliografske jedinice broj: 835509

Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa

Witkowski, Andrzej; Li, Chunlian; Zgłobicka, Izabela; Yu, Shu-xian; Ashworth, Matt; Dabek, Przemysław; Qin, Song; Tang, Cheng; Krzywda, Marta; Ruppel, Manfred et al.
Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa // Journal of coastal research, 32 (2016), S.I. 74; 166-195 doi:10.2112/SI74-016.1 (međunarodna recenzija, članak, znanstveni)

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Naslov
Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa

Autori
Witkowski, Andrzej ; Li, Chunlian ; Zgłobicka, Izabela ; Yu, Shu-xian ; Ashworth, Matt ; Dabek, Przemysław ; Qin, Song ; Tang, Cheng ; Krzywda, Marta ; Ruppel, Manfred ; Theriot, Edward C. ; Jansen, Robert K. ; Car, Ana ; Płociński, Tomasz ; Wang, Yin-chu ; Sabir, Jamal S. M. ; Daniszewska-Kowalczyk, Genowefa ; Kierzek, Agnieszka ; Hajrah, Nahid H.

Izvornik
Journal of coastal research (0749-0208) 32 (2016), S.I. 74; 166-195

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
Diatoms ( Bacillariophyta ) ; Bohai Sea ; Yellow Sea ; littoral zone ; metagenomics ; multigene approach (rbcL ; psbC ; SSU) ; biodiversity ; biogeography ; ubiquistic taxa ; Red Sea ; Adriatic Sea.

Sažetak
Diatoms are important contributors to the benthic microeukaryote flora. This manuscript lays the foundation for future metagenomic and environmental sequencing projects off coastal China by curating diatom DNA sequences from the Yantai region of the Bohai and Yellow Seas (Northeast China). These studies are based on cultures established from samples collected in different seasons from marine littoral and supralittoral zones in 2013 and 2014. Thirty- six diatom strains were cultured successfully and identification of these clones was determined by light and scanning electron microscopy(LM and SEM) and DNA sequencing of the nuclear-encoded small subunit ribosomal RNA (SSU)and chloroplast-encoded rbcL and psbC genes. The strains primarily represent raphid pennate genera, such as Amphora, Amphora (Oxyamphora), Caloneis, Diploneis, Halamphora, Navicula, Nitzschia, Parlibellus, Pleurosigma, Surirella and Tryblionella. When the DNA markers from these strains were analysed in a multi-gene phylogeny, we found that some clones-particularly within the genera Amphora, Navicula and Nitzschia—show greater than expected genetic diversity despite their very similar morphology and morphometrics. We also compared the molecular and morphological identities of several seemingly ubiquitous marine littoral taxa in the genera Amphora and Nitzschia from the Indian Ocean and Atlantic Ocean, the Red Sea and Adriatic Sea to their Yellow Sea counterparts.

Izvorni jezik
Engleski

Znanstvena područja
Biologija

Napomena
S.I. 74: Environmental Processes and the Natural and Anthropogenic Forcing in the Bohai Sea, Eastern Asia.



POVEZANOST RADA

Ustanove:
Sveučilište u Dubrovniku

Profili:

Avatar Url Ana Car (autor)

Poveznice na cjeloviti tekst rada:

Pristup cjelovitom tekstu rada doi www.jcronline.org dx.doi.org

Citiraj ovu publikaciju:

Witkowski, Andrzej; Li, Chunlian; Zgłobicka, Izabela; Yu, Shu-xian; Ashworth, Matt; Dabek, Przemysław; Qin, Song; Tang, Cheng; Krzywda, Marta; Ruppel, Manfred et al.
Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa // Journal of coastal research, 32 (2016), S.I. 74; 166-195 doi:10.2112/SI74-016.1 (međunarodna recenzija, članak, znanstveni)
Witkowski, A., Li, C., Zgłobicka, I., Yu, S., Ashworth, M., Dabek, P., Qin, S., Tang, C., Krzywda, M. & Ruppel, M. (2016) Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa. Journal of coastal research, 32 (S.I. 74), 166-195 doi:10.2112/SI74-016.1.
@article{article, author = {Witkowski, Andrzej and Li, Chunlian and Zg\lobicka, Izabela and Yu, Shu-xian and Ashworth, Matt and Dabek, Przemys\law and Qin, Song and Tang, Cheng and Krzywda, Marta and Ruppel, Manfred and Theriot, Edward C. and Jansen, Robert K. and Car, Ana and P\loci\'{n}ski, Tomasz and Wang, Yin-chu and Sabir, Jamal S. M. and Daniszewska-Kowalczyk, Genowefa and Kierzek, Agnieszka and Hajrah, Nahid H.}, year = {2016}, pages = {166-195}, DOI = {10.2112/SI74-016.1}, keywords = {Diatoms ( Bacillariophyta ), Bohai Sea, Yellow Sea, littoral zone, metagenomics, multigene approach (rbcL, psbC, SSU), biodiversity, biogeography, ubiquistic taxa, Red Sea, Adriatic Sea.}, journal = {Journal of coastal research}, doi = {10.2112/SI74-016.1}, volume = {32}, number = {S.I. 74}, issn = {0749-0208}, title = {Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa}, keyword = {Diatoms ( Bacillariophyta ), Bohai Sea, Yellow Sea, littoral zone, metagenomics, multigene approach (rbcL, psbC, SSU), biodiversity, biogeography, ubiquistic taxa, Red Sea, Adriatic Sea.} }
@article{article, author = {Witkowski, Andrzej and Li, Chunlian and Zg\lobicka, Izabela and Yu, Shu-xian and Ashworth, Matt and Dabek, Przemys\law and Qin, Song and Tang, Cheng and Krzywda, Marta and Ruppel, Manfred and Theriot, Edward C. and Jansen, Robert K. and Car, Ana and P\loci\'{n}ski, Tomasz and Wang, Yin-chu and Sabir, Jamal S. M. and Daniszewska-Kowalczyk, Genowefa and Kierzek, Agnieszka and Hajrah, Nahid H.}, year = {2016}, pages = {166-195}, DOI = {10.2112/SI74-016.1}, keywords = {Diatoms ( Bacillariophyta ), Bohai Sea, Yellow Sea, littoral zone, metagenomics, multigene approach (rbcL, psbC, SSU), biodiversity, biogeography, ubiquistic taxa, Red Sea, Adriatic Sea.}, journal = {Journal of coastal research}, doi = {10.2112/SI74-016.1}, volume = {32}, number = {S.I. 74}, issn = {0749-0208}, title = {Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa}, keyword = {Diatoms ( Bacillariophyta ), Bohai Sea, Yellow Sea, littoral zone, metagenomics, multigene approach (rbcL, psbC, SSU), biodiversity, biogeography, ubiquistic taxa, Red Sea, Adriatic Sea.} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus

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