Naslov
Genome-wide association study identifies genetic risk underlying primary rhegmatogenous retinal detachment

Autori
Kirin, Mirna ; Chandra, Aman ; Charteris, G. David ; Hayward, Caroline ; Campbell, Susan ; Ćelap, Ivana ; Benčić, Goran ; Vatavuk, Zoran ; Kirac, Iva ; Richards, J. Allan ; Tenesa, Albert ; Snead, P. Martin ; Fleck, W. Brian ; Singh, Jaswinder ; Harsum, Steven ; MacLaren, E. Robert ; den Hollander, I. Anneke ; Dunlop, G. Malcom ; Hoyng, B. Carel ; Wright, F. Alan ; Campbell, Harry ; Vitart, Veronique ; Mitry, Danny

Izvornik
Human Molecular Genetics (0964-6906) 22 (2013), 15; 3174-3185

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
GWAS ; rhegmatogenous retinal detachment

Sažetak
Rhegmatogenousretinal detachment (RRD) isanimportantcause of vision lossandcanpotentially lead to blindness. The underlying pathogenesis is complex and incompletely understood.We applied a two-stage genetic association discovery phase followed by a replication phase in a combined total of 2833 RRD cases and 7871 controls. The discovery phase involved a genome-wide association scan of 867 affected individuals and 1953 controls from Scotland, followedby genotyping and testing 4347 highest ranking or candidate single nucleotide polymorphisms(SNPs) in independent sets of cases (1000) and controls (2912) of Dutch and British origin. None of the SNPs selected reached a Bonferroni- corrected threshold for significance (P < 1.27 3 1027). The strongest association, for rs12960119 (P 5 1.58 3 1027) located within an intron of the SS18 gene. Further testing was carried out in independent case–control series from London (846 cases) and Croatia (120 cases). The combined meta-analysis identified one association reaching genome-wide significance for rs267738 (OR 5 1.29, P 5 2.11 3 1028), a missense coding SNP and eQTL for CERS2 encoding the protein ceramide synthase 2. Several of the top signals showing suggestive significance in the combined meta-analysis encompassed genes with adocumented role in cell adhesion or migration, includingSS18, TIAM1, TSTA3andLDB2, which warrant further investigation. This first genetic association study ofRRDsupports a polygeniccomponent underlyingRRDrisk since 27.4% of the underlyingRRDliability could be explained by the collective additive effects of the genotyped SNP from the discovery genome- wide scan.

Izvorni jezik
Engleski

Znanstvena područja
Kliničke medicinske znanosti

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