Pretražite po imenu i prezimenu autora, mentora, urednika, prevoditelja

Napredna pretraga

Pregled bibliografske jedinice broj: 693384

Spatial Heterogeneity in the Mediterranean Biodiversity Hotspot Affects Barcoding Accuracy of its Freshwater Fishes


Geiger, Matthias; Herder, Fabian; Monaghan, Michael; Almada, Vitor; Barbieri, Roberta; Bariche, Michel; Berrebi, Patrick; Bohlen, Jörg; Casal-Lopez, Miriam; Delmastro, Giovanni et al.
Spatial Heterogeneity in the Mediterranean Biodiversity Hotspot Affects Barcoding Accuracy of its Freshwater Fishes // Molecular ecology resources, 14 (2014), 6; 1210-1221 doi:10.1111/1755-0998.12257 (međunarodna recenzija, članak, znanstveni)


CROSBI ID: 693384 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
Spatial Heterogeneity in the Mediterranean Biodiversity Hotspot Affects Barcoding Accuracy of its Freshwater Fishes

Autori
Geiger, Matthias ; Herder, Fabian ; Monaghan, Michael ; Almada, Vitor ; Barbieri, Roberta ; Bariche, Michel ; Berrebi, Patrick ; Bohlen, Jörg ; Casal-Lopez, Miriam ; Delmastro, Giovanni ; Denys, Gäel ; Dettai, Agnès ; Doadrio, Ignacio ; Kalogianni, Elena ; Kärst, Heiko ; Kottelat, Maurice ; Kovačić, Marcelo ; Laporte, Martin ; Lorenzoni, Massimo ; Marčić, Zoran ; Özulug, Müfit ; Perdices, Anabel ; Perea, Silvia ; Persat, Henri ; Porcellotti, Stefano ; Puzzi, Cesare ; Robalo, Joana ; Šanda, Radek ; Schneider, Michael ; Slechtova, Vendula ; Stumboudi, Maria ; Walter, Simon ; Freyhof, Jörg

Izvornik
Molecular ecology resources (1755-098X) 14 (2014), 6; 1210-1221

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
Mediterranean Biodiversity Hotspot; molecular identification; DNA barcoding; freshwater diversity; fish; EDGE score

Sažetak
Incomplete knowledge of biodiversity remains a stumbling block for conservation planning, and even occurs within globally important Biodiversity Hotspots. Although technical advances have boosted the power of molecular biodiversity assessments, the link between DNA sequences and species and the analytics to discriminate entities, remain crucial. Here, we present an analysis of the first DNA barcode library for the freshwater fish fauna of the Mediterranean Biodiversity Hotspot (526 spp.), with virtually complete species coverage (498 spp., 98% extant species).In order to build an identification system supporting conservation, we compared species determination by taxonomists to multiple clustering analyses of DNA barcodes for 3165 specimens. The congruence of barcode clusters with morphological determination was strongly dependent on the method of cluster delineation, but was highest with the GMYC model-based approach (83% of all species recovered as GMYC entity). Overall, genetic-morphological discontinuities suggest the existence of up to 64 previously unrecognized candidate species. We found reduced identification accuracy when using the entire DNA-barcode database, compared to analyses on databases for individual river catchments. This scale effect has important implications for barcoding assessments, and suggests that fairly simple identification pipelines provide sufficient resolution in local applications. We calculated EDGE (Evolutionarily Distinct and Globally Endangered) scores in order to identify candidate species for conservation priority, and argue that the evolutionary content of barcode data can be used to detect priority species for future IUCN assessments. We show that large-scale barcoding inventories of complex biotas are feasible and contribute directly to the evaluation of conservation priorities.

Izvorni jezik
Engleski

Znanstvena područja
Biologija



POVEZANOST RADA


Projekti:
119-0000000-3184 - Modeliranje ekološki prihvatljivih protoka rijeke Cetine (Mustafić, Perica, MZOS ) ( CroRIS)

Ustanove:
Prirodoslovno-matematički fakultet, Zagreb,
Hrvatski prirodoslovni muzej,
Sveučilište u Zagrebu

Profili:

Avatar Url Marcelo Kovačić (autor)

Avatar Url Zoran Marčić (autor)

Poveznice na cjeloviti tekst rada:

doi onlinelibrary.wiley.com

Citiraj ovu publikaciju:

Geiger, Matthias; Herder, Fabian; Monaghan, Michael; Almada, Vitor; Barbieri, Roberta; Bariche, Michel; Berrebi, Patrick; Bohlen, Jörg; Casal-Lopez, Miriam; Delmastro, Giovanni et al.
Spatial Heterogeneity in the Mediterranean Biodiversity Hotspot Affects Barcoding Accuracy of its Freshwater Fishes // Molecular ecology resources, 14 (2014), 6; 1210-1221 doi:10.1111/1755-0998.12257 (međunarodna recenzija, članak, znanstveni)
Geiger, M., Herder, F., Monaghan, M., Almada, V., Barbieri, R., Bariche, M., Berrebi, P., Bohlen, J., Casal-Lopez, M. & Delmastro, G. (2014) Spatial Heterogeneity in the Mediterranean Biodiversity Hotspot Affects Barcoding Accuracy of its Freshwater Fishes. Molecular ecology resources, 14 (6), 1210-1221 doi:10.1111/1755-0998.12257.
@article{article, author = {Geiger, Matthias and Herder, Fabian and Monaghan, Michael and Almada, Vitor and Barbieri, Roberta and Bariche, Michel and Berrebi, Patrick and Bohlen, J\"{o}rg and Casal-Lopez, Miriam and Delmastro, Giovanni and Denys, G\"{a}el and Dettai, Agn\`{e}s and Doadrio, Ignacio and Kalogianni, Elena and K\"{a}rst, Heiko and Kottelat, Maurice and Kova\v{c}i\'{c}, Marcelo and Laporte, Martin and Lorenzoni, Massimo and Mar\v{c}i\'{c}, Zoran and \"{O}zulug, M\"{u}fit and Perdices, Anabel and Perea, Silvia and Persat, Henri and Porcellotti, Stefano and Puzzi, Cesare and Robalo, Joana and \v{S}anda, Radek and Schneider, Michael and Slechtova, Vendula and Stumboudi, Maria and Walter, Simon and Freyhof, J\"{o}rg}, year = {2014}, pages = {1210-1221}, DOI = {10.1111/1755-0998.12257}, keywords = {Mediterranean Biodiversity Hotspot, molecular identification, DNA barcoding, freshwater diversity, fish, EDGE score}, journal = {Molecular ecology resources}, doi = {10.1111/1755-0998.12257}, volume = {14}, number = {6}, issn = {1755-098X}, title = {Spatial Heterogeneity in the Mediterranean Biodiversity Hotspot Affects Barcoding Accuracy of its Freshwater Fishes}, keyword = {Mediterranean Biodiversity Hotspot, molecular identification, DNA barcoding, freshwater diversity, fish, EDGE score} }
@article{article, author = {Geiger, Matthias and Herder, Fabian and Monaghan, Michael and Almada, Vitor and Barbieri, Roberta and Bariche, Michel and Berrebi, Patrick and Bohlen, J\"{o}rg and Casal-Lopez, Miriam and Delmastro, Giovanni and Denys, G\"{a}el and Dettai, Agn\`{e}s and Doadrio, Ignacio and Kalogianni, Elena and K\"{a}rst, Heiko and Kottelat, Maurice and Kova\v{c}i\'{c}, Marcelo and Laporte, Martin and Lorenzoni, Massimo and Mar\v{c}i\'{c}, Zoran and \"{O}zulug, M\"{u}fit and Perdices, Anabel and Perea, Silvia and Persat, Henri and Porcellotti, Stefano and Puzzi, Cesare and Robalo, Joana and \v{S}anda, Radek and Schneider, Michael and Slechtova, Vendula and Stumboudi, Maria and Walter, Simon and Freyhof, J\"{o}rg}, year = {2014}, pages = {1210-1221}, DOI = {10.1111/1755-0998.12257}, keywords = {Mediterranean Biodiversity Hotspot, molecular identification, DNA barcoding, freshwater diversity, fish, EDGE score}, journal = {Molecular ecology resources}, doi = {10.1111/1755-0998.12257}, volume = {14}, number = {6}, issn = {1755-098X}, title = {Spatial Heterogeneity in the Mediterranean Biodiversity Hotspot Affects Barcoding Accuracy of its Freshwater Fishes}, keyword = {Mediterranean Biodiversity Hotspot, molecular identification, DNA barcoding, freshwater diversity, fish, EDGE score} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Scopus
  • MEDLINE


Citati:





    Contrast
    Increase Font
    Decrease Font
    Dyslexic Font