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Pregled bibliografske jedinice broj: 641600

BAT (Berry Analysis Tool): A high-throughput image interpretation tool to aquire the number, diameter, and volume of grapevine berries


Kicherer, A.; Roscher, R.; Herzog, K.; Šimon, Silvio; Förstner, W.; Töpfer, R.
BAT (Berry Analysis Tool): A high-throughput image interpretation tool to aquire the number, diameter, and volume of grapevine berries // Vitis, 52 (2013), 3; 129-135 (međunarodna recenzija, članak, znanstveni)


CROSBI ID: 641600 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
BAT (Berry Analysis Tool): A high-throughput image interpretation tool to aquire the number, diameter, and volume of grapevine berries

Autori
Kicherer, A. ; Roscher, R. ; Herzog, K. ; Šimon, Silvio ; Förstner, W. ; Töpfer, R.

Izvornik
Vitis (0042-7500) 52 (2013), 3; 129-135

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
HT-phenotyping; image interpretation; grapevine berry size; berry morphology

Sažetak
QTL-analysis (quantitative trait loci) and marker development rely on efficient phenotyping techniques. Objectivity and precision of a phenotypic data evaluation is crucial but time consuming. In the present study a high-throughput image interpretation tool was developed to acquire automatically number, size, and volume of grape berries from RGB (red-green-blue) images. Individual berries of one cluster were placed on a black construction (300 x 300 mm)to take a RGB image from the top. The image interpretation od one dataset with an arbitrary number of images runs automatically using the BAT (Berry-Analysis-Tool) developed in MATLAB. For validation of results, the number of berries was counted and their size was measured using a digital calliper. A measuring cylinder was used to determine reliability the berry volume by displacement of water. All placed berries could be counted by BAT 100% correctly. Manual ratings compared with BAT ratings showed strong correlation of r = 0.96 for mean berry diameter/image and r = 0.98 for cluster volume.

Izvorni jezik
Engleski

Znanstvena područja
Poljoprivreda (agronomija)



POVEZANOST RADA


Projekti:
178-1781844-1925 - Genetička identifikacija i genetska varijabilnost sorti vinove loze i voćaka (Pejić, Ivan, MZOS ) ( CroRIS)

Ustanove:
Agronomski fakultet, Zagreb

Profili:

Avatar Url Silvio Šimon (autor)

Citiraj ovu publikaciju:

Kicherer, A.; Roscher, R.; Herzog, K.; Šimon, Silvio; Förstner, W.; Töpfer, R.
BAT (Berry Analysis Tool): A high-throughput image interpretation tool to aquire the number, diameter, and volume of grapevine berries // Vitis, 52 (2013), 3; 129-135 (međunarodna recenzija, članak, znanstveni)
Kicherer, A., Roscher, R., Herzog, K., Šimon, S., Förstner, W. & Töpfer, R. (2013) BAT (Berry Analysis Tool): A high-throughput image interpretation tool to aquire the number, diameter, and volume of grapevine berries. Vitis, 52 (3), 129-135.
@article{article, author = {Kicherer, A. and Roscher, R. and Herzog, K. and \v{S}imon, Silvio and F\"{o}rstner, W. and T\"{o}pfer, R.}, year = {2013}, pages = {129-135}, keywords = {HT-phenotyping, image interpretation, grapevine berry size, berry morphology}, journal = {Vitis}, volume = {52}, number = {3}, issn = {0042-7500}, title = {BAT (Berry Analysis Tool): A high-throughput image interpretation tool to aquire the number, diameter, and volume of grapevine berries}, keyword = {HT-phenotyping, image interpretation, grapevine berry size, berry morphology} }
@article{article, author = {Kicherer, A. and Roscher, R. and Herzog, K. and \v{S}imon, Silvio and F\"{o}rstner, W. and T\"{o}pfer, R.}, year = {2013}, pages = {129-135}, keywords = {HT-phenotyping, image interpretation, grapevine berry size, berry morphology}, journal = {Vitis}, volume = {52}, number = {3}, issn = {0042-7500}, title = {BAT (Berry Analysis Tool): A high-throughput image interpretation tool to aquire the number, diameter, and volume of grapevine berries}, keyword = {HT-phenotyping, image interpretation, grapevine berry size, berry morphology} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus





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