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Pregled bibliografske jedinice broj: 552606

Prediction of gene expressivity through codon usage- mediated translational optimization


Roller, Maša; Lucić, Vedran; Perica, Tina; Vlahoviček, Kristian
Prediction of gene expressivity through codon usage- mediated translational optimization // Despite degeneracy of the genetic code synonymous codons are not used with equal frequencies within a (meta)genome. Most importantly, genes that are expressed at high levels, i.e. housekeeping genes, use a preferred set codons. This finding allows us to predict gene expressivity within a (meta)genome by measuring the distance of each gene from a reference set of housekeeping genes.
Heidelberg, Njemačka, 2010. (poster, nije recenziran, sažetak, ostalo)


CROSBI ID: 552606 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
Prediction of gene expressivity through codon usage- mediated translational optimization

Autori
Roller, Maša ; Lucić, Vedran ; Perica, Tina ; Vlahoviček, Kristian

Vrsta, podvrsta i kategorija rada
Sažeci sa skupova, sažetak, ostalo

Skup
Despite degeneracy of the genetic code synonymous codons are not used with equal frequencies within a (meta)genome. Most importantly, genes that are expressed at high levels, i.e. housekeeping genes, use a preferred set codons. This finding allows us to predict gene expressivity within a (meta)genome by measuring the distance of each gene from a reference set of housekeeping genes.

Mjesto i datum
Heidelberg, Njemačka, 20.09.2010. - 25.09.2010

Vrsta sudjelovanja
Poster

Vrsta recenzije
Nije recenziran

Ključne riječi
metagenomics; codon usage; translational optimization

Sažetak
Despite degeneracy of the genetic code synonymous codons are not used with equal frequencies within a (meta)genome. Most importantly, genes that are expressed at high levels, i.e. housekeeping genes, use a preferred set codons. This finding allows us to predict gene expressivity within a (meta)genome by measuring the distance of each gene from a reference set of housekeeping genes.

Izvorni jezik
Engleski

Znanstvena područja
Biologija



POVEZANOST RADA


Ustanove:
Prirodoslovno-matematički fakultet, Zagreb


Citiraj ovu publikaciju:

Roller, Maša; Lucić, Vedran; Perica, Tina; Vlahoviček, Kristian
Prediction of gene expressivity through codon usage- mediated translational optimization // Despite degeneracy of the genetic code synonymous codons are not used with equal frequencies within a (meta)genome. Most importantly, genes that are expressed at high levels, i.e. housekeeping genes, use a preferred set codons. This finding allows us to predict gene expressivity within a (meta)genome by measuring the distance of each gene from a reference set of housekeeping genes.
Heidelberg, Njemačka, 2010. (poster, nije recenziran, sažetak, ostalo)
Roller, M., Lucić, V., Perica, T. & Vlahoviček, K. (2010) Prediction of gene expressivity through codon usage- mediated translational optimization. U: Despite degeneracy of the genetic code synonymous codons are not used with equal frequencies within a (meta)genome. Most importantly, genes that are expressed at high levels, i.e. housekeeping genes, use a preferred set codons. This finding allows us to predict gene expressivity within a (meta)genome by measuring the distance of each gene from a reference set of housekeeping genes..
@article{article, author = {Roller, Ma\v{s}a and Luci\'{c}, Vedran and Perica, Tina and Vlahovi\v{c}ek, Kristian}, year = {2010}, keywords = {metagenomics, codon usage, translational optimization}, title = {Prediction of gene expressivity through codon usage- mediated translational optimization}, keyword = {metagenomics, codon usage, translational optimization}, publisherplace = {Heidelberg, Njema\v{c}ka} }
@article{article, author = {Roller, Ma\v{s}a and Luci\'{c}, Vedran and Perica, Tina and Vlahovi\v{c}ek, Kristian}, year = {2010}, keywords = {metagenomics, codon usage, translational optimization}, title = {Prediction of gene expressivity through codon usage- mediated translational optimization}, keyword = {metagenomics, codon usage, translational optimization}, publisherplace = {Heidelberg, Njema\v{c}ka} }




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