Naslov
Molecular modelling of copper(II) complexes with histidine

Autori
Marković, Marijana ; Gomzi, Vjeran ; Sabolović, Jasmina

Vrsta, podvrsta i kategorija rada
Sažeci sa skupova, sažetak, znanstveni

Izvornik
Book of Abstracts, Tenth International Summer School on Biophysics Supramolecular structure and function / Pifat-Mrzljak, Greta ; Zahradka, Ksenija - Zagreb : Institut Ruđer Bošković, 2009, 132-132

ISBN
978-953-6690-81-7

Skup
Tenth International Summer School on Biophysics Supramolecular structure and function

Mjesto i datum
Rovinj, Hrvatska, 19.09.2009. - 01.10.2009

Vrsta sudjelovanja
Poster

Vrsta recenzije
Međunarodna recenzija

Ključne riječi
molecular mechanics; copper(II); amino acid; histidine; force field;
(molecular mechanics; copper(II); amino acid; histidine; force field)

Sažetak
Copper is an essential transition metal usually complexed in metalloproteins and low-molecular- weight complexes with peptides and amino acids in biological fluids. L-Histidine was identified as the predominant amino acid bound to copper(II) in the bis(L-histidinato)copper(II) complex (with imidazole nitrogen, amino nitrogen, and carboxylato oxygen donor atoms) and in mixed copper(II) complexes with other L-amino acids in human blood serum [1]. Their prevailing species and stability constants in aqueous solution were derived by spectroscopic and electrochemical methods. However, these methods are unable to provide details on the geometry in solution. We have developed a set of force field empirical parameters equally applicable for predicting and simulating the structural properties of the copper(II) complexes with aliphatic alpha–amino acids (the donor atoms are amino nitrogen and carboxylato oxygen atoms) in vacuo and in the crystal by molecular mechanics (MM) calculations, as well as in aqueous solution by molecular dynamics (MD) simulations [2]. To be able to model also copper(II)-histidinato complexes, we included new atom types for imidazole ring atoms and their interactions to a force field parametrisation. The parametrisation was based on the experimental crystal and molecular structures of the bis copper(II) complexes with L-histidine and D, L- histidine and quantum chemically gas-phase optimised geometries of their anhydrous and aqua complexes. The ability of the new force field to reproduce and predict the structural properties of the copper(II) histidinato complexes in the gas phase, in simulated crystalline surroundings, and solvated in water is examined.

Izvorni jezik
Engleski

Znanstvena područja
Fizika, Kemija

POVEZANOST RADA