Pregled bibliografske jedinice broj: 407573
Spectrum-like graphical representation of RNA secondary structure
Spectrum-like graphical representation of RNA secondary structure // International Journal of Quantum Chemistry, 109 (2009), 13; 2982-2995 doi:10.1002/qua.22175 (međunarodna recenzija, članak, znanstveni)
CROSBI ID: 407573 Za ispravke kontaktirajte CROSBI podršku putem web obrasca
Naslov
Spectrum-like graphical representation of RNA secondary structure
Autori
Randić, Milan ; Vračko, Marjan ; Novič, Marjana ; Plavšić, Dejan
Izvornik
International Journal of Quantum Chemistry (0020-7608) 109
(2009), 13;
2982-2995
Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni
Ključne riječi
RNA; RNA secondary structure; spectral representation; RNA adjacency matrix
Sažetak
We consider graphical representation for RNA secondary structure by assigning four horizontal lines to the unpaired bases A, C, G, U and four horizontal lines to paired bases A, C, G, U. The RNA graphical representation based on eight equidistant horizontal lines can be viewed as natural extension of the earlier four-line graphical representation of DNA (Randi et al., Chem Phys Lett, 2003, 371, 202) to RNA. Numerical characterization of RNA is based on 8 × 8 matrices recording the adjacency of the nucleotide bases in the primary sequence of RNA when RNA is read from 5 to 3. The approach is illustrated on a set of nine viral RNAs, reported in the literature.
Izvorni jezik
Engleski
Znanstvena područja
Kemija
POVEZANOST RADA
Projekti:
098-0982929-2917 - Spektroskopija NMR i modeliranje bioaktivnih molekula (Plavšić, Dejan, MZOS ) ( CroRIS)
Ustanove:
Institut "Ruđer Bošković", Zagreb
Profili:
Dejan Plavšić
(autor)
Citiraj ovu publikaciju:
Časopis indeksira:
- Current Contents Connect (CCC)
- Web of Science Core Collection (WoSCC)
- Science Citation Index Expanded (SCI-EXP)
- SCI-EXP, SSCI i/ili A&HCI
- Scopus
Uključenost u ostale bibliografske baze podataka::
- CA Search (Chemical Abstracts)
