Pregled bibliografske jedinice broj: 249803
Model.it: building three dimensional DNA models from sequence data.
Model.it: building three dimensional DNA models from sequence data. // Bioinformatics, 16 (2000), 11; 1044-1045 (međunarodna recenzija, članak, znanstveni)
CROSBI ID: 249803 Za ispravke kontaktirajte CROSBI podršku putem web obrasca
Naslov
Model.it: building three dimensional DNA models from sequence data.
Autori
Vlahoviček, Kristian ; Pongor, Sandor
Izvornik
Bioinformatics (1367-4803) 16
(2000), 11;
1044-1045
Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni
Ključne riječi
bioinformatics; web server; molecular modelling; DNA curvature
(bioinformatika; web server; molekulsko modeliranje; zakrivljenost DNA)
Sažetak
Summary: A WWW server is described for creating 3D models of canonical or bent DNA starting from sequence data. Predicted DNA trajectory is first computed based on a choice of di- and tri-nucleotide models (M.G.Munteanu et al. , Trends Biochem. Sci. 23, 341– 347, 1998) ; an atomic model is then constructed and optionally energy-minimized with constrained molecular dynamics. The data are presented as a standard PDB file, directly viewable on the user’ s PC using any molecule manipulation program.
Izvorni jezik
Engleski
Znanstvena područja
Biologija, Računarstvo
POVEZANOST RADA
Projekti:
0119161
Ustanove:
Prirodoslovno-matematički fakultet, Zagreb
Profili:
Kristian Vlahoviček
(autor)
Citiraj ovu publikaciju:
Časopis indeksira:
- Current Contents Connect (CCC)
- Web of Science Core Collection (WoSCC)
- Science Citation Index Expanded (SCI-EXP)
- SCI-EXP, SSCI i/ili A&HCI
- Scopus
- MEDLINE
Uključenost u ostale bibliografske baze podataka::
- Biological Abstracts
