Pregled bibliografske jedinice broj: 210091
Transmembrane helices predictor - the upgrade of the SPLIT algorithm
Transmembrane helices predictor - the upgrade of the SPLIT algorithm // 1st South Eastern European Workshop on Practical Approaches to Computational Biology
Opatija, Hrvatska, 2005. (poster, međunarodna recenzija, sažetak, znanstveni)
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Naslov
Transmembrane helices predictor - the upgrade of the SPLIT algorithm
Autori
Zoranić, Larisa ; Jerončić, Ana ; Juretić, Davor
Vrsta, podvrsta i kategorija rada
Sažeci sa skupova, sažetak, znanstveni
Izvornik
1st South Eastern European Workshop on Practical Approaches to Computational Biology
/ - , 2005
Skup
1st South Eastern European Workshop on Practical Approaches to Computational Biology
Mjesto i datum
Opatija, Hrvatska, 01.09.2005. - 04.09.2005
Vrsta sudjelovanja
Poster
Vrsta recenzije
Međunarodna recenzija
Ključne riječi
predictor; transmembrane helices; signal sequences
Sažetak
Total of 16815 signal sequences were gathered from the Swiss-Prot 44 data base. The upgrade SPLIT 4.0_sig had improved performance parameters with respect to SPLIT 4.0 (http://split.pmfst.hr) when tested at the TMH benchmark(http://cubic.bioc.columbia.edu/services/ tmh_benchmark). Better choice of amino acid scales reduced false positive prediction on a set of soluble proteins from 13% to 11%.
Izvorni jezik
Engleski
Znanstvena područja
Fizika, Biologija
