Pregled bibliografske jedinice broj: 202976
The SBASE domain sequence resource, release 12: prediction of protein domain-architecture using support vector machines
The SBASE domain sequence resource, release 12: prediction of protein domain-architecture using support vector machines // Nucleic acids research, 33 (2005), D223-D225 (međunarodna recenzija, članak, znanstveni)
CROSBI ID: 202976 Za ispravke kontaktirajte CROSBI podršku putem web obrasca
Naslov
The SBASE domain sequence resource, release 12: prediction of protein domain-architecture using support vector machines
Autori
Vlahoviček, Kristian ; Kaján, László ; Ágoston, Vilmos ; Pongor, Sándor
Izvornik
Nucleic acids research (0305-1048) 33
(2005);
D223-D225
Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni
Ključne riječi
-
Sažetak
SBASE (http://www.icgeb.trieste.it/sbase) is an online resource designed to facilitate the detection of domain homologies based on sequence database search. The present release of the SBASE A library of protein domain sequences contains 972 397 protein sequence segments annotated by structure, function, ligand-binding or cellular topology, clustered into 8547 domain groups. SBASE B contains 169 916 domain sequences clustered into 2526 less well-characterized groups. Domain prediction is based on an evaluation of database search results in comparison with a ‘ similarity network’ of inter-sequence similarity scores, using support vector machines trained on similarity search results of known domains.
Izvorni jezik
Engleski
Znanstvena područja
Biologija, Računarstvo, Biotehnologija
POVEZANOST RADA
Projekti:
0119161
Ustanove:
Prirodoslovno-matematički fakultet, Zagreb
Profili:
Kristian Vlahoviček
(autor)
Citiraj ovu publikaciju:
Časopis indeksira:
- Current Contents Connect (CCC)
- Web of Science Core Collection (WoSCC)
- Science Citation Index Expanded (SCI-EXP)
- SCI-EXP, SSCI i/ili A&HCI
- Scopus
- MEDLINE
Uključenost u ostale bibliografske baze podataka::
- Chemical Abstracts
