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Pregled bibliografske jedinice broj: 1227211

Bayesian gradient sensing in the presence of rotational diffusion


Novak, Maja; Friedrich, Benjamin M
Bayesian gradient sensing in the presence of rotational diffusion // New Journal of Physics, 23 (2021), 4; 043026-1 doi:10.1088/1367-2630/abdb70 (međunarodna recenzija, članak, znanstveni)


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Naslov
Bayesian gradient sensing in the presence of rotational diffusion

Autori
Novak, Maja ; Friedrich, Benjamin M

Izvornik
New Journal of Physics (1367-2630) 23 (2021), 4; 043026-1

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
chemotaxis, physical limits of chemosensation, rotational diffusion, sequential Bayesian estimation, bearing tracking, time-varying environment

Sažetak
Biological cells estimate concentration gradients of signaling molecules with a precision that is limited not only by sensing noise, but additionally by the cell's own stochastic motion. We ask for the theoretical limits of gradient estimation in the presence of both motility and sensing noise. We introduce a minimal model of a stationary chemotactic agent in the plane subject to rotational diffusion with rotational diffusion coefficient D. The agent uses Bayesian estimation to optimally infer the gradient direction relative to itself from noisy concentration measurements. Meanwhile, this direction changes on a time-scale 1/D. We show that the optimal effective measurement time, which characterizes the time interval over which past gradient measurements should be averaged to reduce sensing noise, does not scale with the rotational diffusion time 1/D, but with the square root (rD)^(−1/2), where r is a rate of information gain defined as a signal-to-noise ratio normalized per unit time. This result for gradient sensing parallels a recent result by Mora et al (2019 Phys. Rev. Lett.) for sensing absolute concentration in time-varying environments.

Izvorni jezik
Engleski

Znanstvena područja
Fizika



POVEZANOST RADA


Profili:

Avatar Url Maja Novak (autor)

Poveznice na cjeloviti tekst rada:

doi iopscience.iop.org

Citiraj ovu publikaciju:

Novak, Maja; Friedrich, Benjamin M
Bayesian gradient sensing in the presence of rotational diffusion // New Journal of Physics, 23 (2021), 4; 043026-1 doi:10.1088/1367-2630/abdb70 (međunarodna recenzija, članak, znanstveni)
Novak, M. & Friedrich, B. (2021) Bayesian gradient sensing in the presence of rotational diffusion. New Journal of Physics, 23 (4), 043026-1 doi:10.1088/1367-2630/abdb70.
@article{article, author = {Novak, Maja and Friedrich, Benjamin M}, year = {2021}, pages = {043026-1-043026-18}, DOI = {10.1088/1367-2630/abdb70}, keywords = {chemotaxis, physical limits of chemosensation, rotational diffusion, sequential Bayesian estimation, bearing tracking, time-varying environment}, journal = {New Journal of Physics}, doi = {10.1088/1367-2630/abdb70}, volume = {23}, number = {4}, issn = {1367-2630}, title = {Bayesian gradient sensing in the presence of rotational diffusion}, keyword = {chemotaxis, physical limits of chemosensation, rotational diffusion, sequential Bayesian estimation, bearing tracking, time-varying environment} }
@article{article, author = {Novak, Maja and Friedrich, Benjamin M}, year = {2021}, pages = {043026-1-043026-18}, DOI = {10.1088/1367-2630/abdb70}, keywords = {chemotaxis, physical limits of chemosensation, rotational diffusion, sequential Bayesian estimation, bearing tracking, time-varying environment}, journal = {New Journal of Physics}, doi = {10.1088/1367-2630/abdb70}, volume = {23}, number = {4}, issn = {1367-2630}, title = {Bayesian gradient sensing in the presence of rotational diffusion}, keyword = {chemotaxis, physical limits of chemosensation, rotational diffusion, sequential Bayesian estimation, bearing tracking, time-varying environment} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus


Citati:





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