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Pregled bibliografske jedinice broj: 1220124

Update on Magellan, the software for the analysis of a single gender lineage in pedigrees

Hrsak, Dalibor; Brajković, Vladimir; Čubric-Ćurik, Vlatka; Ćurik, Ino; Ristov, Strahil
Update on Magellan, the software for the analysis of a single gender lineage in pedigrees // Proceedings of 2022 International Conference on Electrical, Computer and Energy Technologies (ICECET)
Prag: Institute of Electrical and Electronics Engineers (IEEE), 2022. str. 1-3 doi:10.1109/icecet55527.2022.9872932 (predavanje, međunarodna recenzija, cjeloviti rad (in extenso), znanstveni)

CROSBI ID: 1220124 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
Update on Magellan, the software for the analysis of a single gender lineage in pedigrees

Autori
Hrsak, Dalibor ; Brajković, Vladimir ; Čubric-Ćurik, Vlatka ; Ćurik, Ino ; Ristov, Strahil

Vrsta, podvrsta i kategorija rada
Radovi u zbornicima skupova, cjeloviti rad (in extenso), znanstveni

Izvornik
Proceedings of 2022 International Conference on Electrical, Computer and Energy Technologies (ICECET) / - Prag : Institute of Electrical and Electronics Engineers (IEEE), 2022, 1-3

ISBN
978-1-6654-7087-2

Skup
International Conference on Electrical, Computer and Energy Technologies (ICECET 2022)

Mjesto i datum
Prag, Češka Republika, 20.07.2022. - 22.07.2022

Vrsta sudjelovanja
Predavanje

Vrsta recenzije
Međunarodna recenzija

Ključne riječi
pedigree trees ; mitogenome polymorphism ; Y-chromosome polymorphism, population genetics software ; quantitative genetics software

Sažetak
Quantitative genetics is the field of research that links the genetic (DNA) information (genotype) to the physical traits (phenotype), with the applications in human and livestock populations. While the majority of research, and tools, have been focused on cellular DNA where, as the result of the recombination, the inheritance is not straightforward, a distinct approach must be used with mitochondrial DNA where the inheritance is conserved in maternal line. We present a new version of the Magellan software [1] used for the analysis of the influence of gene polymorphism on quantitative traits based on the single gender lineage in pedigrees. While the main target of usage are mitogenome polymorphism and maternal lineages, the methods can be applied to Y-chromosome polymorphism and paternal lineages. The update is the answer to user feedback and it consists of improvement in several existing features, and the addition of some new ones. This has resulted in overall increase in software efficiency and user friendliness. The address of the Magellan software page is https://github.com/sristov/magellan.

Izvorni jezik
Engleski

Znanstvena područja
Računarstvo, Poljoprivreda (agronomija)



POVEZANOST RADA

Projekti:
HRZZ-IP-2018-01-7317 - Napredni deterministički i hibridni algoritmi na nizovima, sljedovima i stablima s primjenama u tehničkim znanostima i znanostima o životu (ALGSEQ18) (Ristov, Strahil, HRZZ - 2018-01) ( CroRIS)
IP-2018-01-8708 - Primjena NGS metoda u procjeni genomske varijabilnosti preživača (ANAGRAMS) (Čubrić Čurik, Vlatka, HRZZ - 2018-01) ( CroRIS)
--KK.01.1.1.01.009 - Napredne metode i tehnologije u znanosti o podatcima i kooperativnim sustavima (DATACROSS) (Šmuc, Tomislav; Lončarić, Sven; Petrović, Ivan; Jokić, Andrej; Palunko, Ivana) ( CroRIS)

Ustanove:
Institut "Ruđer Bošković", Zagreb,
Agronomski fakultet, Zagreb

Profili:

Avatar Url Ino Čurik (autor)

Avatar Url Vladimir Brajković (autor)

Avatar Url Vlatka Čubrić Čurik (autor)

Avatar Url Dalibor Hršak (autor)

Avatar Url Strahil Ristov (autor)

Poveznice na cjeloviti tekst rada:

doi ieeexplore.ieee.org

Citiraj ovu publikaciju:

Hrsak, Dalibor; Brajković, Vladimir; Čubric-Ćurik, Vlatka; Ćurik, Ino; Ristov, Strahil
Update on Magellan, the software for the analysis of a single gender lineage in pedigrees // Proceedings of 2022 International Conference on Electrical, Computer and Energy Technologies (ICECET)
Prag: Institute of Electrical and Electronics Engineers (IEEE), 2022. str. 1-3 doi:10.1109/icecet55527.2022.9872932 (predavanje, međunarodna recenzija, cjeloviti rad (in extenso), znanstveni)
Hrsak, D., Brajković, V., Čubric-Ćurik, V., Ćurik, I. & Ristov, S. (2022) Update on Magellan, the software for the analysis of a single gender lineage in pedigrees. U: Proceedings of 2022 International Conference on Electrical, Computer and Energy Technologies (ICECET) doi:10.1109/icecet55527.2022.9872932.
@article{article, author = {Hrsak, Dalibor and Brajkovi\'{c}, Vladimir and \v{C}ubric-\'{C}urik, Vlatka and \'{C}urik, Ino and Ristov, Strahil}, year = {2022}, pages = {1-3}, DOI = {10.1109/icecet55527.2022.9872932}, keywords = {pedigree trees, mitogenome polymorphism, Y-chromosome polymorphism, population genetics software, quantitative genetics software}, doi = {10.1109/icecet55527.2022.9872932}, isbn = {978-1-6654-7087-2}, title = {Update on Magellan, the software for the analysis of a single gender lineage in pedigrees}, keyword = {pedigree trees, mitogenome polymorphism, Y-chromosome polymorphism, population genetics software, quantitative genetics software}, publisher = {Institute of Electrical and Electronics Engineers (IEEE)}, publisherplace = {Prag, \v{C}e\v{s}ka Republika} }
@article{article, author = {Hrsak, Dalibor and Brajkovi\'{c}, Vladimir and \v{C}ubric-\'{C}urik, Vlatka and \'{C}urik, Ino and Ristov, Strahil}, year = {2022}, pages = {1-3}, DOI = {10.1109/icecet55527.2022.9872932}, keywords = {pedigree trees, mitogenome polymorphism, Y-chromosome polymorphism, population genetics software, quantitative genetics software}, doi = {10.1109/icecet55527.2022.9872932}, isbn = {978-1-6654-7087-2}, title = {Update on Magellan, the software for the analysis of a single gender lineage in pedigrees}, keyword = {pedigree trees, mitogenome polymorphism, Y-chromosome polymorphism, population genetics software, quantitative genetics software}, publisher = {Institute of Electrical and Electronics Engineers (IEEE)}, publisherplace = {Prag, \v{C}e\v{s}ka Republika} }

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