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Pregled bibliografske jedinice broj: 1219630

Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions

VarGoats Consortium; Nijman, Isaäc; Rosen, Benjamin; Bardou, Philippe; Faraut, Thomas : Cumer, Tristan; Daly, Kevin; Zheng, Zhuqing; Cai, Yudong; Asadollahpour, Hojjat; Kul, Bengi Çınar et al.
Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions // Molecular ecology, 31 (2022), 4364-4380 doi:10.1111/mec.16579 (međunarodna recenzija, članak, znanstveni)

CROSBI ID: 1219630 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions

Autori
VarGoats Consortium ; Nijman, Isaäc ; Rosen, Benjamin ; Bardou, Philippe ; Faraut, Thomas : Cumer, Tristan ; Daly, Kevin ; Zheng, Zhuqing ; Cai, Yudong ; Asadollahpour, Hojjat ; Kul, Bengi Çınar ; Zhang, Wei-Yi ; Ayin, Guangxin ; Baird, Hayley ; Bakhtin, Meirat ; Bâlteanu, Valentin ; Barfield, Diana ; Berger, Beate ; Blichfeldt, Thor ; Boink, Geert ; Bugiwati, Sri ; Cai, Zexi ; Carolan, Sean ; Clark, Emily ; Cubric-Curik, Vlatka ; Dagong, Muhammad ; Dorji, Tashi ; Drew, Louise ; Guo, Jiazhong ; Hallsson, Jón ; Horvat, Simon ; Kantanen, Juha ; Kawaguchi, Fuki ; Kazymbet, Polat ; Khayatzadeh, Negar ; Kim, Namshin ; Shah, Manoj Kumar ; Liao, Yuying ; Martínez, Amparo ; Masangkay, Joseph ; Masaoka, Maho ; Mazza, Raffaele ; McEwan, John ; Milanesi, Marco ; Omar, Faruque ; Nomura, Yuto ; Ouchene- Khelifi, Nadjet-Amina ; Pereira, Filipe ; Sahana, Goutam ; Salavati, Mazdak ; Sasazaki, Shinji ; Da Silva, Anne ; Simčič, Mojca ; Sölkner, Johann ; Sutherland, Alison ; Tigchelaar, Johannes ; Zhang, Hongpin ; Econogene Consortium ; Ajmone-Marsan, Paolo ; Bradley, Daniel ; Colli, Licia ; Drögemüller, Cord ; Jiang, Yu ; Lei, Chuzhao ; Mannen, Hideyuki ; Pompanon, François ; Tosser- Klopp, Gwenola ; Lenstra, Johannes

Izvornik
Molecular ecology (0962-1083) 31 (2022); 4364-4380

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
domestication ; goat ; haplogroup ; introgression ; migration ; phylogeography ; Y-chromosome

Sažetak
By their paternal transmission, Y-chromosomal haplotypes are sensitive markers of population history and male-mediated introgression. Previous studies identified biallelic single-nucleotide variants in the SRY, ZFY and DDX3Y genes, which in domestic goats identified four major Y-chromosomal haplotypes, Y1A, Y1B, Y2A and Y2B, with a marked geographical partitioning. Here, we extracted goat Y-chromosomal variants from whole-genome sequences of 386 domestic goats (75 breeds) and seven wild goat species, which were generated by the VarGoats goat genome project. Phylogenetic analyses indicated domestic haplogroups corresponding to Y1B, Y2A and Y2B, respectively, whereas Y1A is split into Y1AA and Y1AB. All five haplogroups were detected in 26 ancient DNA samples from southeast Europe or Asia. Haplotypes from present- day bezoars are not shared with domestic goats and are attached to deep nodes of the trees and networks. Haplogroup distributions for 186 domestic breeds indicate ancient paternal population bottlenecks and expansions during migrations into northern Europe, eastern and southern Asia, and Africa south of the Sahara. In addition, sharing of haplogroups indicates male- mediated introgressions, most notably an early gene flow from Asian goats into Madagascar and the crossbreeding that in the 19th century resulted in the popular Boer and Anglo-Nubian breeds. More recent introgressions are those from European goats into the native Korean goat population and from Boer goat into Uganda, Kenya, Tanzania, Malawi and Zimbabwe. This study illustrates the power of the Y-chromosomal variants for reconstructing the history of domestic species with a wide geographical range.

Izvorni jezik
Engleski

Znanstvena područja
Biologija, Poljoprivreda (agronomija), Interdisciplinarne biotehničke znanosti



POVEZANOST RADA

Profili:

Avatar Url Vlatka Čubrić Čurik (autor)

Poveznice na cjeloviti tekst rada:

doi onlinelibrary.wiley.com

Citiraj ovu publikaciju:

VarGoats Consortium; Nijman, Isaäc; Rosen, Benjamin; Bardou, Philippe; Faraut, Thomas : Cumer, Tristan; Daly, Kevin; Zheng, Zhuqing; Cai, Yudong; Asadollahpour, Hojjat; Kul, Bengi Çınar et al.
Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions // Molecular ecology, 31 (2022), 4364-4380 doi:10.1111/mec.16579 (međunarodna recenzija, članak, znanstveni)
VarGoats Consortium, Nijman, I., Rosen, B., Bardou, P., Faraut, Thomas : Cumer, Tristan, Daly, K., Zheng, Z., Cai, Y., Asadollahpour, H. & Kul, B. (2022) Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions. Molecular ecology, 31, 4364-4380 doi:10.1111/mec.16579.
@article{article, author = {Nijman, Isa\"{a}c and Rosen, Benjamin and Bardou, Philippe and Daly, Kevin and Zheng, Zhuqing and Cai, Yudong and Asadollahpour, Hojjat and Kul, Bengi \c{C}\inar and Zhang, Wei-Yi and Ayin, Guangxin and Baird, Hayley and Bakhtin, Meirat and B\^{a}lteanu, Valentin and Barfield, Diana and Berger, Beate and Blichfeldt, Thor and Boink, Geert and Bugiwati, Sri and Cai, Zexi and Carolan, Sean and Clark, Emily and Cubric-Curik, Vlatka and Dagong, Muhammad and Dorji, Tashi and Drew, Louise and Guo, Jiazhong and Hallsson, J\'{o}n and Horvat, Simon and Kantanen, Juha and Kawaguchi, Fuki and Kazymbet, Polat and Khayatzadeh, Negar and Kim, Namshin and Shah, Manoj Kumar and Liao, Yuying and Mart\'{\i}nez, Amparo and Masangkay, Joseph and Masaoka, Maho and Mazza, Raffaele and McEwan, John and Milanesi, Marco and Omar, Faruque and Nomura, Yuto and Ouchene- Khelifi, Nadjet-Amina and Pereira, Filipe and Sahana, Goutam and Salavati, Mazdak and Sasazaki, Shinji and Da Silva, Anne and Sim\v{c}i\v{c}, Mojca and S\"{o}lkner, Johann and Sutherland, Alison and Tigchelaar, Johannes and Zhang, Hongpin and Ajmone-Marsan, Paolo and Bradley, Daniel and Colli, Licia and Dr\"{o}gem\"{u}ller, Cord and Jiang, Yu and Lei, Chuzhao and Mannen, Hideyuki and Pompanon, Fran\c{c}ois and Tosser- Klopp, Gwenola and Lenstra, Johannes}, year = {2022}, pages = {4364-4380}, DOI = {10.1111/mec.16579}, keywords = {domestication, goat, haplogroup, introgression, migration, phylogeography, Y-chromosome}, journal = {Molecular ecology}, doi = {10.1111/mec.16579}, volume = {31}, issn = {0962-1083}, title = {Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions}, keyword = {domestication, goat, haplogroup, introgression, migration, phylogeography, Y-chromosome} }
@article{article, author = {Nijman, Isa\"{a}c and Rosen, Benjamin and Bardou, Philippe and Daly, Kevin and Zheng, Zhuqing and Cai, Yudong and Asadollahpour, Hojjat and Kul, Bengi \c{C}\inar and Zhang, Wei-Yi and Ayin, Guangxin and Baird, Hayley and Bakhtin, Meirat and B\^{a}lteanu, Valentin and Barfield, Diana and Berger, Beate and Blichfeldt, Thor and Boink, Geert and Bugiwati, Sri and Cai, Zexi and Carolan, Sean and Clark, Emily and Cubric-Curik, Vlatka and Dagong, Muhammad and Dorji, Tashi and Drew, Louise and Guo, Jiazhong and Hallsson, J\'{o}n and Horvat, Simon and Kantanen, Juha and Kawaguchi, Fuki and Kazymbet, Polat and Khayatzadeh, Negar and Kim, Namshin and Shah, Manoj Kumar and Liao, Yuying and Mart\'{\i}nez, Amparo and Masangkay, Joseph and Masaoka, Maho and Mazza, Raffaele and McEwan, John and Milanesi, Marco and Omar, Faruque and Nomura, Yuto and Ouchene- Khelifi, Nadjet-Amina and Pereira, Filipe and Sahana, Goutam and Salavati, Mazdak and Sasazaki, Shinji and Da Silva, Anne and Sim\v{c}i\v{c}, Mojca and S\"{o}lkner, Johann and Sutherland, Alison and Tigchelaar, Johannes and Zhang, Hongpin and Ajmone-Marsan, Paolo and Bradley, Daniel and Colli, Licia and Dr\"{o}gem\"{u}ller, Cord and Jiang, Yu and Lei, Chuzhao and Mannen, Hideyuki and Pompanon, Fran\c{c}ois and Tosser- Klopp, Gwenola and Lenstra, Johannes}, year = {2022}, pages = {4364-4380}, DOI = {10.1111/mec.16579}, keywords = {domestication, goat, haplogroup, introgression, migration, phylogeography, Y-chromosome}, journal = {Molecular ecology}, doi = {10.1111/mec.16579}, volume = {31}, issn = {0962-1083}, title = {Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions}, keyword = {domestication, goat, haplogroup, introgression, migration, phylogeography, Y-chromosome} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus
  • MEDLINE

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