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Pregled bibliografske jedinice broj: 1157302

Low availability of code in ecology: A call for urgent action


Culina, Antica; van den Berg, Ilona; Evans, Simon; Sánchez-Tójar, Alfredo
Low availability of code in ecology: A call for urgent action // PLoS biology, 18 (2020), 7; e3000763, 9 doi:10.1371/journal.pbio.3000763 (međunarodna recenzija, članak, znanstveni)


CROSBI ID: 1157302 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
Low availability of code in ecology: A call for urgent action
(Low availability of code in ecology: A call for urgent action)

Autori
Culina, Antica ; van den Berg, Ilona ; Evans, Simon ; Sánchez-Tójar, Alfredo

Izvornik
PLoS biology (1544-9173) 18 (2020), 7; E3000763, 9

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
reproducibility ; analysis code ; ecology

Sažetak
Access to analytical code is essential for transparent and reproducible research. We review the state of code availability in ecology using a random sample of 346 nonmolecular articles published between 2015 and 2019 under mandatory or encouraged code-sharing policies. Our results call for urgent action to increase code availability: only 27% of eligible articles were accompanied by code. In contrast, data were available for 79% of eligible articles, highlighting that code availability is an important limiting factor for computational reproducibility in ecology. Although the percentage of ecological journals with mandatory or encouraged code-sharing policies has increased considerably, from 15% in 2015 to 75% in 2020, our results show that code-sharing policies are not adhered to by most authors. We hope these results will encourage journals, institutions, funding agencies, and researchers to address this alarming situation.

Izvorni jezik
Engleski

Znanstvena područja
Biologija, Interdisciplinarne prirodne znanosti, Informacijske i komunikacijske znanosti



POVEZANOST RADA


Profili:

Avatar Url Antica Čulina (autor)

Poveznice na cjeloviti tekst rada:

doi doi.org

Citiraj ovu publikaciju:

Culina, Antica; van den Berg, Ilona; Evans, Simon; Sánchez-Tójar, Alfredo
Low availability of code in ecology: A call for urgent action // PLoS biology, 18 (2020), 7; e3000763, 9 doi:10.1371/journal.pbio.3000763 (međunarodna recenzija, članak, znanstveni)
Culina, A., van den Berg, I., Evans, S. & Sánchez-Tójar, A. (2020) Low availability of code in ecology: A call for urgent action. PLoS biology, 18 (7), e3000763, 9 doi:10.1371/journal.pbio.3000763.
@article{article, author = {Culina, Antica and van den Berg, Ilona and Evans, Simon and S\'{a}nchez-T\'{o}jar, Alfredo}, year = {2020}, pages = {9}, DOI = {10.1371/journal.pbio.3000763}, chapter = {e3000763}, keywords = {reproducibility, analysis code, ecology}, journal = {PLoS biology}, doi = {10.1371/journal.pbio.3000763}, volume = {18}, number = {7}, issn = {1544-9173}, title = {Low availability of code in ecology: A call for urgent action}, keyword = {reproducibility, analysis code, ecology}, chapternumber = {e3000763} }
@article{article, author = {Culina, Antica and van den Berg, Ilona and Evans, Simon and S\'{a}nchez-T\'{o}jar, Alfredo}, year = {2020}, pages = {9}, DOI = {10.1371/journal.pbio.3000763}, chapter = {e3000763}, keywords = {reproducibility, analysis code, ecology}, journal = {PLoS biology}, doi = {10.1371/journal.pbio.3000763}, volume = {18}, number = {7}, issn = {1544-9173}, title = {Low availability of code in ecology: A call for urgent action}, keyword = {reproducibility, analysis code, ecology}, chapternumber = {e3000763} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus
  • MEDLINE
  • Nature Index


Citati:





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