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Pregled bibliografske jedinice broj: 1018282

Divergent selection and genetic structure of Sideritis scardica populations from southern Balkan Peninsula as revealed by AFLP fingerprinting


Grdiša, Martina; Radosavljević, Ivan; Liber, Zlatko; Stefkov, Gjoshe; Ralli, Parthenopi; Chatzopoulou, Paschalina S.; Carović-Stanko, Klaudija; Šatović, Zlatko
Divergent selection and genetic structure of Sideritis scardica populations from southern Balkan Peninsula as revealed by AFLP fingerprinting // Scientific reports, 9 (2019), 12767, 14 doi:10.1038/s41598-019-49097-x (međunarodna recenzija, članak, znanstveni)


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Naslov
Divergent selection and genetic structure of Sideritis scardica populations from southern Balkan Peninsula as revealed by AFLP fingerprinting

Autori
Grdiša, Martina ; Radosavljević, Ivan ; Liber, Zlatko ; Stefkov, Gjoshe ; Ralli, Parthenopi ; Chatzopoulou, Paschalina S. ; Carović-Stanko, Klaudija ; Šatović, Zlatko

Izvornik
Scientific reports (2045-2322) 9 (2019); 12767, 14

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
Balkan Peninsula ; genetic diversity ; mountain tea ; Sideritis scardica Griseb.

Sažetak
Sideritis scardica Giseb. is a subalpine/alpine plant species endemic to the central part of the Balkan Peninsula. In this study, we combined Amplified Fragment Length Polymorphism (AFLP) and environmental data to examine the adaptive genetic variations in S. scardica natural populations sampled in contrasting environments. A total of 226 AFLP loci were genotyped in 166 individuals from nine populations. The results demonstrated low gene diversity, ranging from 0.095 to 0.133 and significant genetic differentiation ranging from 0.115 to 0.408. Seven genetic clusters were revealed by Bayesian clustering methods as well as by Discriminant Analysis of Principal Components and each population formed its respective cluster. The exception were populations P02 Mt. Shara and P07 Mt. Vermio, that were admixed between two clusters. Both landscape genetic methods Mcheza and BayeScan identified a total of seven (3.10%) markers exhibiting higher levels of genetic differentiation among populations. The spatial analysis method Samβada detected 50 individual markers (22.12%) associated with bioclimatic variables, among them seven were identified by both Mcheza and BayeScan as being under directional selection. Four bioclimatic variables associated with five out of seven outliers were related to precipitation, suggesting that this variable is the key factor affecting the adaptive variation of S. scardica.

Izvorni jezik
Engleski

Znanstvena područja
Interdisciplinarne prirodne znanosti, Poljoprivreda (agronomija)



POVEZANOST RADA


Ustanove:
Prirodoslovno-matematički fakultet, Zagreb,
Agronomski fakultet, Zagreb

Poveznice na cjeloviti tekst rada:

doi

Citiraj ovu publikaciju:

Grdiša, Martina; Radosavljević, Ivan; Liber, Zlatko; Stefkov, Gjoshe; Ralli, Parthenopi; Chatzopoulou, Paschalina S.; Carović-Stanko, Klaudija; Šatović, Zlatko
Divergent selection and genetic structure of Sideritis scardica populations from southern Balkan Peninsula as revealed by AFLP fingerprinting // Scientific reports, 9 (2019), 12767, 14 doi:10.1038/s41598-019-49097-x (međunarodna recenzija, članak, znanstveni)
Grdiša, M., Radosavljević, I., Liber, Z., Stefkov, G., Ralli, P., Chatzopoulou, P., Carović-Stanko, K. & Šatović, Z. (2019) Divergent selection and genetic structure of Sideritis scardica populations from southern Balkan Peninsula as revealed by AFLP fingerprinting. Scientific reports, 9, 12767, 14 doi:10.1038/s41598-019-49097-x.
@article{article, author = {Grdi\v{s}a, Martina and Radosavljevi\'{c}, Ivan and Liber, Zlatko and Stefkov, Gjoshe and Ralli, Parthenopi and Chatzopoulou, Paschalina S. and Carovi\'{c}-Stanko, Klaudija and \v{S}atovi\'{c}, Zlatko}, year = {2019}, pages = {14}, DOI = {10.1038/s41598-019-49097-x}, chapter = {12767}, keywords = {Balkan Peninsula, genetic diversity, mountain tea, Sideritis scardica Griseb.}, journal = {Scientific reports}, doi = {10.1038/s41598-019-49097-x}, volume = {9}, issn = {2045-2322}, title = {Divergent selection and genetic structure of Sideritis scardica populations from southern Balkan Peninsula as revealed by AFLP fingerprinting}, keyword = {Balkan Peninsula, genetic diversity, mountain tea, Sideritis scardica Griseb.}, chapternumber = {12767} }
@article{article, author = {Grdi\v{s}a, Martina and Radosavljevi\'{c}, Ivan and Liber, Zlatko and Stefkov, Gjoshe and Ralli, Parthenopi and Chatzopoulou, Paschalina S. and Carovi\'{c}-Stanko, Klaudija and \v{S}atovi\'{c}, Zlatko}, year = {2019}, pages = {14}, DOI = {10.1038/s41598-019-49097-x}, chapter = {12767}, keywords = {Balkan Peninsula, genetic diversity, mountain tea, Sideritis scardica Griseb.}, journal = {Scientific reports}, doi = {10.1038/s41598-019-49097-x}, volume = {9}, issn = {2045-2322}, title = {Divergent selection and genetic structure of Sideritis scardica populations from southern Balkan Peninsula as revealed by AFLP fingerprinting}, keyword = {Balkan Peninsula, genetic diversity, mountain tea, Sideritis scardica Griseb.}, chapternumber = {12767} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • Social Science Citation Index (SSCI)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus
  • MEDLINE


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