Naslov
Real-Time Analysis of a Metagenomic Sample Obtained by Nanopore Based Sequencing Technology

Autori
Vujević, Ivan

Vrsta, podvrsta i kategorija rada
Ocjenski radovi, diplomski rad, diplomski

Fakultet
Fakultet elektrotehnike i računarstva

Mjesto
Zagreb

Datum
05.07

Godina
2016

Stranica
45

Mentor
Šikić, Mile

Neposredni voditelj
Križanović, Krešimir

Ključne riječi
metagenomics; diagnostics; treatment

Sažetak
Fast and cheap metagenomic sample analysis could be very useful for medical diagnosis, food quality control and discovering harmful parasites on plants. Traditional laboratory methods are either long-lasting or oriented towards a single pathogen species. MinION sequencing devices by Oxford Nanopore Technologies are relatively cheap and suitable for application in the field. We developed a tool which in the first step discovers all organisms whose sequence have high similarity to the reads obtained from the samples and after that determines the organisms present in the sample.

Izvorni jezik
Engleski

Znanstvena područja
Biotehnologija

POVEZANOST RADA