Pregled bibliografske jedinice broj: 621964
DADP: the database of anuran defense peptides
DADP: the database of anuran defense peptides // Bioinformatics, 28 (2012), 10; 1406-1407 doi:10.1093/bioinformatics/bts141 (međunarodna recenzija, članak, znanstveni)
CROSBI ID: 621964 Za ispravke kontaktirajte CROSBI podršku putem web obrasca
Naslov
DADP: the database of anuran defense peptides
Autori
Novković, Mario ; Simunić, Juraj ; Bojović, Viktor ; Tossi, Alessandro ; Juretić, Davor
Izvornik
Bioinformatics (1367-4803) 28
(2012), 10;
1406-1407
Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni
Ključne riječi
anuran; defense peptides; database; signal peptide; antimicrobial
Sažetak
Anuran tissues, and especially skin, are a rich source of bioactive peptides and their precursors. We here present a manually curated database of antimicrobial and other defense peptides with a total of 2571 entries, most of them in the precursor form with demarcated signal peptide (SP), acidic proregion(s) and bioactive moiety(s) corresponding to 1923 non-identical bioactive sequences. Search functions on the corresponding web server facilitate the extraction of six distinct SP classes. The more conserved of these can be used for searching cDNA and UniProtKB databases for potential bioactive peptides, for creating PROSITE search patterns, and for phylogenetic analysis.
Izvorni jezik
Engleski
Znanstvena područja
Biologija
POVEZANOST RADA
Projekti:
177-1770495-0476 - Razvoj i primjene principa maksimalne proizvodnje entropije (Juretić, Davor, MZOS ) ( CroRIS)
Ustanove:
Institut "Ruđer Bošković", Zagreb,
Prirodoslovno-matematički fakultet, Split
Poveznice na cjeloviti tekst rada:
doi bioinformatics.oxfordjournals.org bioinformatics.oxfordjournals.orgCitiraj ovu publikaciju:
Časopis indeksira:
- Current Contents Connect (CCC)
- Web of Science Core Collection (WoSCC)
- Science Citation Index Expanded (SCI-EXP)
- SCI-EXP, SSCI i/ili A&HCI
- Scopus
- MEDLINE
