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Pregled bibliografske jedinice broj: 457844

Similarity and dissimilarity in correlations of genomic DNA

Podobnik, Boris; Shao, Jia; Dokholyand, Nikolay V.; Zlatić, Vinko; Stanley, H. Eugene; Grosse, Ivo
Similarity and dissimilarity in correlations of genomic DNA // Physica. A, Statistical mechanics and its applications, 373 (2007), 497-502 doi:10.1016/j.physa.2006.05.041 (međunarodna recenzija, članak, znanstveni)

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Naslov
Similarity and dissimilarity in correlations of genomic DNA

Autori
Podobnik, Boris ; Shao, Jia ; Dokholyand, Nikolay V. ; Zlatić, Vinko ; Stanley, H. Eugene ; Grosse, Ivo

Izvornik
Physica. A, Statistical mechanics and its applications (0378-4371) 373 (2007); 497-502

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
autocorrelation ; humane chromosomes ; rice chromosomes

Sažetak
We analyze auto-correlations of human chromosomes 1–22 and rice chromosomes 1–12 for seven binary mapping rules and find that the correlation patterns are different for different rules but almost identical for all of the chromosomes, despite their varying lengths and gc contents. We propose a simple stochastic process for modeling these correlations, and we find that the proposed process can reproduce, quantitatively and qualitatively, the correlation patterns found in the genomes of human and rice.

Izvorni jezik
Engleski

Znanstvena područja
Fizika, Biologija



POVEZANOST RADA

Projekti:
098-0352828-2863 - Površine i nanostrukture: Teorijski pristupi i numerički proračuni (Šokčević, Damir, MZOS ) ( CroRIS)
0098004
0119263

Ustanove:
Institut "Ruđer Bošković", Zagreb,
Zagrebačka škola ekonomije i managementa, Zagreb,
Sveučilište u Rijeci

Profili:

Avatar Url Vinko Zlatić (autor)

Poveznice na cjeloviti tekst rada:

Pristup cjelovitom tekstu rada doi www.sciencedirect.com doi.org

Citiraj ovu publikaciju:

Podobnik, Boris; Shao, Jia; Dokholyand, Nikolay V.; Zlatić, Vinko; Stanley, H. Eugene; Grosse, Ivo
Similarity and dissimilarity in correlations of genomic DNA // Physica. A, Statistical mechanics and its applications, 373 (2007), 497-502 doi:10.1016/j.physa.2006.05.041 (međunarodna recenzija, članak, znanstveni)
Podobnik, B., Shao, J., Dokholyand, N., Zlatić, V., Stanley, H. & Grosse, I. (2007) Similarity and dissimilarity in correlations of genomic DNA. Physica. A, Statistical mechanics and its applications, 373, 497-502 doi:10.1016/j.physa.2006.05.041.
@article{article, author = {Podobnik, Boris and Shao, Jia and Dokholyand, Nikolay V. and Zlati\'{c}, Vinko and Stanley, H. Eugene and Grosse, Ivo}, year = {2007}, pages = {497-502}, DOI = {10.1016/j.physa.2006.05.041}, keywords = {autocorrelation, humane chromosomes, rice chromosomes}, journal = {Physica. A, Statistical mechanics and its applications}, doi = {10.1016/j.physa.2006.05.041}, volume = {373}, issn = {0378-4371}, title = {Similarity and dissimilarity in correlations of genomic DNA}, keyword = {autocorrelation, humane chromosomes, rice chromosomes} }
@article{article, author = {Podobnik, Boris and Shao, Jia and Dokholyand, Nikolay V. and Zlati\'{c}, Vinko and Stanley, H. Eugene and Grosse, Ivo}, year = {2007}, pages = {497-502}, DOI = {10.1016/j.physa.2006.05.041}, keywords = {autocorrelation, humane chromosomes, rice chromosomes}, journal = {Physica. A, Statistical mechanics and its applications}, doi = {10.1016/j.physa.2006.05.041}, volume = {373}, issn = {0378-4371}, title = {Similarity and dissimilarity in correlations of genomic DNA}, keyword = {autocorrelation, humane chromosomes, rice chromosomes} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus

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