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Pregled bibliografske jedinice broj: 1279615

How genomics can help biodiversity conservation

(ERGA (The European Reference Genome Atlas)) Theissinger, Kathrin; Fernandes, Carlos; Formenti, Giulio; Bista, Iliana; Berg, Paul R.; Bleidorn, Christoph; Bombarely, Aureliano; Crottini, Angelica; Gallo, Guido R.; Godoy, José A. et al.
How genomics can help biodiversity conservation // Trends in Genetics, 39 (2023), 7; 545-559 doi:10.1016/j.tig.2023.01.005 (međunarodna recenzija, pregledni rad, znanstveni)

CROSBI ID: 1279615 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
How genomics can help biodiversity conservation

Autori
Theissinger, Kathrin ; Fernandes, Carlos ; Formenti, Giulio ; Bista, Iliana ; Berg, Paul R. ; Bleidorn, Christoph ; Bombarely, Aureliano ; Crottini, Angelica ; Gallo, Guido R. ; Godoy, José A. ; Jentoft, Sissel ; Malukiewicz, Joanna ; Mouton, Alice ; Oomen, Rebekah A. ; Paez, Sadye ; Palsbøll, Per J. ; Pampoulie, Christophe ; Ruiz-López, María J. ; Secomandi, Simona ; Svardal, Hannes ; Theofanopoulou, Constantina ; de Vries, Jan ; Waldvogel, Ann-Marie ; Zhang, Guojie ; Jarvis, Erich D. ; Bálint, Miklós ; Ciofi, Claudio ; Waterhouse, Robert M. ; Mazzoni, Camila J. ; Höglund, Jacob ; Aghayan, Sargis A. ; Alioto, Tyler S. ; Almudi, Isabel ; Alvarez, Nadir ; Alves, Paulo C. ; Amorim do Rosario, Isabel R. ; Antunes, Agostinho ; Arribas, Paula ; Baldrian, Petr ; Bertorelle, Giorgio ; Böhne, Astrid ; Bonisoli-Alquati, Andrea ; Boštjančić, Ljudevit L. ; Boussau, Bastien ; Breton, Catherine M. ; Buzan, Elena ; Campos, Paula F. ; Carreras, Carlos ; Castro, L. FIlipe C. ; Chueca, Luis J. ; Čiampor, Fedor ; Conti, Elena ; Cook-Deegan, Robert ; Croll, Daniel ; Cunha, Mónica V. ; Delsuc, Frédéric ; Dennis, Alice B. ; Dimitrov, Dimitar ; Faria, Rui ; Favre, Adrien ; Fedrigo, Olivier D. ; Fernández, Rosa ; Ficetola, Gentile Francesco ; Flot, Jean-François ; Gabaldón, Toni ; Agius, Dolores R. ; Giani, Alice M. ; Gilbert, M. Thomas P. ; Grebenc, Tine ; Guschanski, Katerina ; Guyot, Romain ; Hausdorf, Bernhard ; Hawlitschek, Oliver ; Heintzman, Peter D. ; Heinze, Berthold ; Hiller, Michael ; Husemann, Martin ; Iannucci, Alessio ; Irisarri, Iker ; Jakobsen, Kjetill S. ; Klinga, Peter ; Kloch, Agnieszka ; Kratochwil, Claudius F. ; Kusche, Henrik ; Layton, Kara K.S. ; Leonard, Jennifer A. ; Lerat, Emmanuelle ; Liti, Gianni ; Manousaki, Tereza ; Marques-Bonet, Tomas ; Matos-Maraví, Pável ; Matschiner, Michael ; Maumus, Florian ; Mc Cartney, Ann M. ; Meiri, Shai ; Melo-Ferreira, José ; Mengual, Ximo ; Monaghan, Michael T. ; Montagna, Matteo ; Mysłajek, Robert W. ; Neiber, Marco T. ; Nicolas, Violaine ; Novo, Marta ; Ozretić, Petar ; Palero, Ferran ; Pârvulescu, Lucian ; Pascual, Marta ; Paulo, Octávio S. ; Pavlek, Martina ; Pegueroles, Cinta ; Pellissier, Loïc ; Pesole, Graziano ; Primmer, Craig R. ; Riesgo, Ana ; Rüber, Lukas ; Rubolini, Diego ; Salvi, Daniele ; Seehausen, Ole ; Seidel, Matthias ; Studer, Bruno ; Theodoridis, Spyros ; Thines, Marco ; Urban, Lara ; Vasemägi, Anti ; Vella, Adriana ; Vella, Noel ; Vernes, Sonja C. ; Vernesi, Cristiano ; Vieites, David R. ; Wheat, Christopher W. ; Wörheide, Gert ; Wurm, Yannick ; Zammit, Gabrielle

Kolaboracija
ERGA (The European Reference Genome Atlas)

Izvornik
Trends in Genetics (0168-9525) 39 (2023), 7; 545-559

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, pregledni rad, znanstveni

Ključne riječi
Anthropocene biodiversity genomics genomic toolbox reference genomes conservation applications European Reference Genome Atlas (ERGA)

Sažetak
The availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main approaches and applications in biodiversity and conservation genomics, considering practical factors, such as cost, time, prerequisite skills, and current shortcomings of applications. Most approaches perform best in combination with reference genomes from the target species or closely related species. We review case studies to illustrate how reference genomes can facilitate biodiversity research and conservation across the tree of life. We conclude that the time is ripe to view reference genomes as fundamental resources and to integrate their use as a best practice in conservation genomics.

Izvorni jezik
Engleski

Znanstvena područja
Biologija



POVEZANOST RADA

Ustanove:
Institut "Ruđer Bošković", Zagreb

Profili:

Avatar Url Martina Pavlek (autor)

Avatar Url Petar Ozretić (autor)

Poveznice na cjeloviti tekst rada:

Pristup cjelovitom tekstu rada doi www.sciencedirect.com

Citiraj ovu publikaciju:

(ERGA (The European Reference Genome Atlas)) Theissinger, Kathrin; Fernandes, Carlos; Formenti, Giulio; Bista, Iliana; Berg, Paul R.; Bleidorn, Christoph; Bombarely, Aureliano; Crottini, Angelica; Gallo, Guido R.; Godoy, José A. et al.
How genomics can help biodiversity conservation // Trends in Genetics, 39 (2023), 7; 545-559 doi:10.1016/j.tig.2023.01.005 (međunarodna recenzija, pregledni rad, znanstveni)
(ERGA (The European Reference Genome Atlas)) (ERGA (The European Reference Genome Atlas)) Theissinger, K., Fernandes, C., Formenti, G., Bista, I., Berg, P., Bleidorn, C., Bombarely, A., Crottini, A., Gallo, G. & Godoy, J. (2023) How genomics can help biodiversity conservation. Trends in Genetics, 39 (7), 545-559 doi:10.1016/j.tig.2023.01.005.
@article{article, author = {Theissinger, Kathrin and Fernandes, Carlos and Formenti, Giulio and Bista, Iliana and Berg, Paul R. and Bleidorn, Christoph and Bombarely, Aureliano and Crottini, Angelica and Gallo, Guido R. and Godoy, Jos\'{e} A. and Jentoft, Sissel and Malukiewicz, Joanna and Mouton, Alice and Oomen, Rebekah A. and Paez, Sadye and Palsb\oll, Per J. and Pampoulie, Christophe and Ruiz-L\'{o}pez, Mar\'{\i}a J. and Secomandi, Simona and Svardal, Hannes and Theofanopoulou, Constantina and de Vries, Jan and Waldvogel, Ann-Marie and Zhang, Guojie and Jarvis, Erich D. and B\'{a}lint, Mikl\'{o}s and Ciofi, Claudio and Waterhouse, Robert M. and Mazzoni, Camila J. and H\"{o}glund, Jacob and Aghayan, Sargis A. and Alioto, Tyler S. and Almudi, Isabel and Alvarez, Nadir and Alves, Paulo C. and Amorim do Rosario, Isabel R. and Antunes, Agostinho and Arribas, Paula and Baldrian, Petr and Bertorelle, Giorgio and B\"{o}hne, Astrid and Bonisoli-Alquati, Andrea and Bo\v{s}tjan\v{c}i\'{c}, Ljudevit L. and Boussau, Bastien and Breton, Catherine M. and Buzan, Elena and Campos, Paula F. and Carreras, Carlos and Castro, L. FIlipe C. and Chueca, Luis J. and \v{C}iampor, Fedor and Conti, Elena and Cook-Deegan, Robert and Croll, Daniel and Cunha, M\'{o}nica V. and Delsuc, Fr\'{e}d\'{e}ric and Dennis, Alice B. and Dimitrov, Dimitar and Faria, Rui and Favre, Adrien and Fedrigo, Olivier D. and Fern\'{a}ndez, Rosa and Ficetola, Gentile Francesco and Flot, Jean-Fran\c{c}ois and Gabald\'{o}n, Toni and Agius, Dolores R. and Giani, Alice M. and Gilbert, M. Thomas P. and Grebenc, Tine and Guschanski, Katerina and Guyot, Romain and Hausdorf, Bernhard and Hawlitschek, Oliver and Heintzman, Peter D. and Heinze, Berthold and Hiller, Michael and Husemann, Martin and Iannucci, Alessio and Irisarri, Iker and Jakobsen, Kjetill S. and Klinga, Peter and Kloch, Agnieszka and Kratochwil, Claudius F. and Kusche, Henrik and Layton, Kara K.S. and Leonard, Jennifer A. and Lerat, Emmanuelle and Liti, Gianni and Manousaki, Tereza and Marques-Bonet, Tomas and Matos-Marav\'{\i}, P\'{a}vel and Matschiner, Michael and Maumus, Florian and Mc Cartney, Ann M. and Meiri, Shai and Melo-Ferreira, Jos\'{e} and Mengual, Ximo and Monaghan, Michael T. and Montagna, Matteo and Mys\lajek, Robert W. and Neiber, Marco T. and Nicolas, Violaine and Novo, Marta and Ozreti\'{c}, Petar and Palero, Ferran and P\^{a}rvulescu, Lucian and Pascual, Marta and Paulo, Oct\'{a}vio S. and Pavlek, Martina and Pegueroles, Cinta and Pellissier, Lo\"{\i}c and Pesole, Graziano and Primmer, Craig R. and Riesgo, Ana and R\"{u}ber, Lukas and Rubolini, Diego and Salvi, Daniele and Seehausen, Ole and Seidel, Matthias and Studer, Bruno and Theodoridis, Spyros and Thines, Marco and Urban, Lara and Vasem\"{a}gi, Anti and Vella, Adriana and Vella, Noel and Vernes, Sonja C. and Vernesi, Cristiano and Vieites, David R. and Wheat, Christopher W. and W\"{o}rheide, Gert and Wurm, Yannick and Zammit, Gabrielle}, year = {2023}, pages = {545-559}, DOI = {10.1016/j.tig.2023.01.005}, keywords = {Anthropocene biodiversity genomics genomic toolbox reference genomes conservation applications European Reference Genome Atlas (ERGA)}, journal = {Trends in Genetics}, doi = {10.1016/j.tig.2023.01.005}, volume = {39}, number = {7}, issn = {0168-9525}, title = {How genomics can help biodiversity conservation}, keyword = {Anthropocene biodiversity genomics genomic toolbox reference genomes conservation applications European Reference Genome Atlas (ERGA)} }
@article{article, author = {Theissinger, Kathrin and Fernandes, Carlos and Formenti, Giulio and Bista, Iliana and Berg, Paul R. and Bleidorn, Christoph and Bombarely, Aureliano and Crottini, Angelica and Gallo, Guido R. and Godoy, Jos\'{e} A. and Jentoft, Sissel and Malukiewicz, Joanna and Mouton, Alice and Oomen, Rebekah A. and Paez, Sadye and Palsb\oll, Per J. and Pampoulie, Christophe and Ruiz-L\'{o}pez, Mar\'{\i}a J. and Secomandi, Simona and Svardal, Hannes and Theofanopoulou, Constantina and de Vries, Jan and Waldvogel, Ann-Marie and Zhang, Guojie and Jarvis, Erich D. and B\'{a}lint, Mikl\'{o}s and Ciofi, Claudio and Waterhouse, Robert M. and Mazzoni, Camila J. and H\"{o}glund, Jacob and Aghayan, Sargis A. and Alioto, Tyler S. and Almudi, Isabel and Alvarez, Nadir and Alves, Paulo C. and Amorim do Rosario, Isabel R. and Antunes, Agostinho and Arribas, Paula and Baldrian, Petr and Bertorelle, Giorgio and B\"{o}hne, Astrid and Bonisoli-Alquati, Andrea and Bo\v{s}tjan\v{c}i\'{c}, Ljudevit L. and Boussau, Bastien and Breton, Catherine M. and Buzan, Elena and Campos, Paula F. and Carreras, Carlos and Castro, L. FIlipe C. and Chueca, Luis J. and \v{C}iampor, Fedor and Conti, Elena and Cook-Deegan, Robert and Croll, Daniel and Cunha, M\'{o}nica V. and Delsuc, Fr\'{e}d\'{e}ric and Dennis, Alice B. and Dimitrov, Dimitar and Faria, Rui and Favre, Adrien and Fedrigo, Olivier D. and Fern\'{a}ndez, Rosa and Ficetola, Gentile Francesco and Flot, Jean-Fran\c{c}ois and Gabald\'{o}n, Toni and Agius, Dolores R. and Giani, Alice M. and Gilbert, M. Thomas P. and Grebenc, Tine and Guschanski, Katerina and Guyot, Romain and Hausdorf, Bernhard and Hawlitschek, Oliver and Heintzman, Peter D. and Heinze, Berthold and Hiller, Michael and Husemann, Martin and Iannucci, Alessio and Irisarri, Iker and Jakobsen, Kjetill S. and Klinga, Peter and Kloch, Agnieszka and Kratochwil, Claudius F. and Kusche, Henrik and Layton, Kara K.S. and Leonard, Jennifer A. and Lerat, Emmanuelle and Liti, Gianni and Manousaki, Tereza and Marques-Bonet, Tomas and Matos-Marav\'{\i}, P\'{a}vel and Matschiner, Michael and Maumus, Florian and Mc Cartney, Ann M. and Meiri, Shai and Melo-Ferreira, Jos\'{e} and Mengual, Ximo and Monaghan, Michael T. and Montagna, Matteo and Mys\lajek, Robert W. and Neiber, Marco T. and Nicolas, Violaine and Novo, Marta and Ozreti\'{c}, Petar and Palero, Ferran and P\^{a}rvulescu, Lucian and Pascual, Marta and Paulo, Oct\'{a}vio S. and Pavlek, Martina and Pegueroles, Cinta and Pellissier, Lo\"{\i}c and Pesole, Graziano and Primmer, Craig R. and Riesgo, Ana and R\"{u}ber, Lukas and Rubolini, Diego and Salvi, Daniele and Seehausen, Ole and Seidel, Matthias and Studer, Bruno and Theodoridis, Spyros and Thines, Marco and Urban, Lara and Vasem\"{a}gi, Anti and Vella, Adriana and Vella, Noel and Vernes, Sonja C. and Vernesi, Cristiano and Vieites, David R. and Wheat, Christopher W. and W\"{o}rheide, Gert and Wurm, Yannick and Zammit, Gabrielle}, year = {2023}, pages = {545-559}, DOI = {10.1016/j.tig.2023.01.005}, keywords = {Anthropocene biodiversity genomics genomic toolbox reference genomes conservation applications European Reference Genome Atlas (ERGA)}, journal = {Trends in Genetics}, doi = {10.1016/j.tig.2023.01.005}, volume = {39}, number = {7}, issn = {0168-9525}, title = {How genomics can help biodiversity conservation}, keyword = {Anthropocene biodiversity genomics genomic toolbox reference genomes conservation applications European Reference Genome Atlas (ERGA)} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus
  • MEDLINE

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