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Pregled bibliografske jedinice broj: 1235143

Analysis of Uterine Morphology in Ovariectomized Rats Treated With Alendronate and Hop Extract Using Open-Source Software


Rođak, Edi; Oršolić, Nada; Grgac, Robert; Rajc, Jasmina; Bakula, Marina; Bijelić, Nikola
Analysis of Uterine Morphology in Ovariectomized Rats Treated With Alendronate and Hop Extract Using Open-Source Software // Image analysis & stereology, 41 (2022), 3; 193-202 doi:105566/ias. 2 791 (međunarodna recenzija, članak, znanstveni)


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Naslov
Analysis of Uterine Morphology in Ovariectomized Rats Treated With Alendronate and Hop Extract Using Open-Source Software

Autori
Rođak, Edi ; Oršolić, Nada ; Grgac, Robert ; Rajc, Jasmina ; Bakula, Marina ; Bijelić, Nikola

Izvornik
Image analysis & stereology (1580-3139) 41 (2022), 3; 193-202

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
alendronate ; hop extract ; image analysis ; open-source ; osteoporosis ; uterus

Sažetak
Free and open-source software for image analysis and morphological measurements in scientific research is rising in popularity and capabilities as new methods, plugins and macros are being actively developed. A semi-automated method for measuring rat uterus morphology using free and open-source software (Gimp and FIJI) is demonstrated in this paper. Research was performed on ovariectomized rats as a model of osteoporosis (with sham-operated control group). The animals were treated with alendronate, hop extract or the combination of the two. Whole histological slides were photographed and images were manually pre-processed in Gimp. Color masks from Gimp were loaded in FIJI and polar transformation and measurements were made using a custom macro. This analysis was supplemented by manual assessment of Ki67 proliferation marker expression by a pathologist. Our results suggest that monotherapy or combination therapy with alendronate and hop extract does not cause proliferation of the endometrium in ovariectomized rats and would be safe for use in osteoporosis treatment in this regard. The semi-automated method used in this research is more precise and unbiased than older manual methods. Furthermore, it can be easily adapted for analysis of whole-slide images of almost any round or oval organ.

Izvorni jezik
Engleski

Znanstvena područja
Biologija, Temeljne medicinske znanosti



POVEZANOST RADA


Ustanove:
Prirodoslovno-matematički fakultet, Zagreb,
Medicinski fakultet, Osijek

Profili:

Avatar Url Nada Oršolić (autor)

Avatar Url Jasmina Rajc (autor)

Avatar Url Edi Rođak (autor)

Avatar Url Nikola Bijelić (autor)

Poveznice na cjeloviti tekst rada:

doi www.ias-iss.org www.researchgate.net

Citiraj ovu publikaciju:

Rođak, Edi; Oršolić, Nada; Grgac, Robert; Rajc, Jasmina; Bakula, Marina; Bijelić, Nikola
Analysis of Uterine Morphology in Ovariectomized Rats Treated With Alendronate and Hop Extract Using Open-Source Software // Image analysis & stereology, 41 (2022), 3; 193-202 doi:105566/ias. 2 791 (međunarodna recenzija, članak, znanstveni)
Rođak, E., Oršolić, N., Grgac, R., Rajc, J., Bakula, M. & Bijelić, N. (2022) Analysis of Uterine Morphology in Ovariectomized Rats Treated With Alendronate and Hop Extract Using Open-Source Software. Image analysis & stereology, 41 (3), 193-202 doi:105566/ias. 2 791.
@article{article, author = {Ro\djak, Edi and Or\v{s}oli\'{c}, Nada and Grgac, Robert and Rajc, Jasmina and Bakula, Marina and Bijeli\'{c}, Nikola}, year = {2022}, pages = {193-202}, DOI = {105566/ias. 2 791}, keywords = {alendronate, hop extract, image analysis, open-source, osteoporosis, uterus}, journal = {Image analysis and stereology}, doi = {105566/ias. 2 791}, volume = {41}, number = {3}, issn = {1580-3139}, title = {Analysis of Uterine Morphology in Ovariectomized Rats Treated With Alendronate and Hop Extract Using Open-Source Software}, keyword = {alendronate, hop extract, image analysis, open-source, osteoporosis, uterus} }
@article{article, author = {Ro\djak, Edi and Or\v{s}oli\'{c}, Nada and Grgac, Robert and Rajc, Jasmina and Bakula, Marina and Bijeli\'{c}, Nikola}, year = {2022}, pages = {193-202}, DOI = {105566/ias. 2 791}, keywords = {alendronate, hop extract, image analysis, open-source, osteoporosis, uterus}, journal = {Image analysis and stereology}, doi = {105566/ias. 2 791}, volume = {41}, number = {3}, issn = {1580-3139}, title = {Analysis of Uterine Morphology in Ovariectomized Rats Treated With Alendronate and Hop Extract Using Open-Source Software}, keyword = {alendronate, hop extract, image analysis, open-source, osteoporosis, uterus} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus


Citati:





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