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Pregled bibliografske jedinice broj: 1198662

A Reduced Snp Panel to Trace Gene Flow Across Southern European Wolf Populations and Detect Hybridization with Other Canis Taxa

Stronen, Astrid Vik; Mattucci, Federica; Fabbri, Elena; Galaverni, Marco; Cocchiararo, Berardino; Nowak, Carsten; Godinho, Raquel; Ruiz- González, Aritz; Kusak, Josip; Skrbinšek, Tomaž et al.
A Reduced Snp Panel to Trace Gene Flow Across Southern European Wolf Populations and Detect Hybridization with Other Canis Taxa // Scientific Reports, 12 (2022), 1; 4195, 14 doi:10.1038/s41598-022-08132-0 (međunarodna recenzija, članak, znanstveni)

CROSBI ID: 1198662 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
A Reduced Snp Panel to Trace Gene Flow Across Southern European Wolf Populations and Detect Hybridization with Other Canis Taxa
(A reduced SNP panel to trace gene flow across southern European wolf populations and detect hybridization with other Canis taxa)

Autori
Stronen, Astrid Vik ; Mattucci, Federica ; Fabbri, Elena ; Galaverni, Marco ; Cocchiararo, Berardino ; Nowak, Carsten ; Godinho, Raquel ; Ruiz- González, Aritz ; Kusak, Josip ; Skrbinšek, Tomaž ; Randi, Ettore ; Vlasseva, Albena ; Mucci, Nadia ; Caniglia, Romolo

Izvornik
Scientific Reports (2045-2322) 12 (2022), 1; 4195, 14

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
Canis ; SNP panel ; hybridization

Sažetak
Abstract Intra- and inter-specific gene flow are natural evolutionary processes. However, human-induced hybridization is a global conservation concern across taxa, and the development of discriminant genetic markers to differentiate among gene flow processes is essential. Wolves ( Canis lupus ) are affected by hybridization, particularly in southern Europe, where ongoing recolonization of historic ranges is augmenting gene flow among divergent populations. Our aim was to provide diagnostic canid markers focused on the long-divergent Iberian, Italian and Dinaric wolf populations, based on existing genomic resources. We used 158 canid samples to select a panel of highly informative single nucleotide polymorphisms (SNPs) to ( i ) distinguish wolves in the three regions from domestic dogs ( C. l. familiaris ) and golden jackals ( C. aureus ), and (ii) identify their first two hybrid generations. The resulting 192 SNPs correctly identified the five canid groups, all simulated first-generation (F1) hybrids (0.482 ≤ Q i ≤ 0.512 between their respective parental groups) and all first backcross (BC1) individuals (0.723 ≤ Q i ≤ 0.827 to parental groups). An assay design and test with invasive and non- invasive canid samples performed successfully for 178 SNPs. By separating natural population admixture from inter-specific hybridization, our reduced panel can help advance evolutionary research, monitoring, and timely conservation management.

Izvorni jezik
Hrvatski

Znanstvena područja
Biologija



POVEZANOST RADA

Ustanove:
Veterinarski fakultet, Zagreb

Profili:

Avatar Url Josip Kusak (autor)

Poveznice na cjeloviti tekst rada:

Pristup cjelovitom tekstu rada doi www.nature.com

Poveznice na istraživačke podatke:

doi.org

Citiraj ovu publikaciju:

Stronen, Astrid Vik; Mattucci, Federica; Fabbri, Elena; Galaverni, Marco; Cocchiararo, Berardino; Nowak, Carsten; Godinho, Raquel; Ruiz- González, Aritz; Kusak, Josip; Skrbinšek, Tomaž et al.
A Reduced Snp Panel to Trace Gene Flow Across Southern European Wolf Populations and Detect Hybridization with Other Canis Taxa // Scientific Reports, 12 (2022), 1; 4195, 14 doi:10.1038/s41598-022-08132-0 (međunarodna recenzija, članak, znanstveni)
Stronen, A., Mattucci, F., Fabbri, E., Galaverni, M., Cocchiararo, B., Nowak, C., Godinho, R., Ruiz- González, A., Kusak, J. & Skrbinšek, T. (2022) A Reduced Snp Panel to Trace Gene Flow Across Southern European Wolf Populations and Detect Hybridization with Other Canis Taxa. Scientific Reports, 12 (1), 4195, 14 doi:10.1038/s41598-022-08132-0.
@article{article, author = {Stronen, Astrid Vik and Mattucci, Federica and Fabbri, Elena and Galaverni, Marco and Cocchiararo, Berardino and Nowak, Carsten and Godinho, Raquel and Ruiz- Gonz\'{a}lez, Aritz and Kusak, Josip and Skrbin\v{s}ek, Toma\v{z} and Randi, Ettore and Vlasseva, Albena and Mucci, Nadia and Caniglia, Romolo}, year = {2022}, pages = {14}, DOI = {10.1038/s41598-022-08132-0}, chapter = {4195}, keywords = {Canis, SNP panel, hybridization}, journal = {Scientific Reports}, doi = {10.1038/s41598-022-08132-0}, volume = {12}, number = {1}, issn = {2045-2322}, title = {A Reduced Snp Panel to Trace Gene Flow Across Southern European Wolf Populations and Detect Hybridization with Other Canis Taxa}, keyword = {Canis, SNP panel, hybridization}, chapternumber = {4195} }
@article{article, author = {Stronen, Astrid Vik and Mattucci, Federica and Fabbri, Elena and Galaverni, Marco and Cocchiararo, Berardino and Nowak, Carsten and Godinho, Raquel and Ruiz- Gonz\'{a}lez, Aritz and Kusak, Josip and Skrbin\v{s}ek, Toma\v{z} and Randi, Ettore and Vlasseva, Albena and Mucci, Nadia and Caniglia, Romolo}, year = {2022}, pages = {14}, DOI = {10.1038/s41598-022-08132-0}, chapter = {4195}, keywords = {Canis, SNP panel, hybridization}, journal = {Scientific Reports}, doi = {10.1038/s41598-022-08132-0}, volume = {12}, number = {1}, issn = {2045-2322}, title = {A reduced SNP panel to trace gene flow across southern European wolf populations and detect hybridization with other Canis taxa}, keyword = {Canis, SNP panel, hybridization}, chapternumber = {4195} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • Social Science Citation Index (SSCI)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus
  • MEDLINE

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