Pretražite po imenu i prezimenu autora, mentora, urednika, prevoditelja

Napredna pretraga

Pregled bibliografske jedinice broj: 916753

Molecular evolution and invasion pattern of Cryphonectria hypovirus 1 in Europe: Mutation rate, and selection pressure differ between genome domains


Mlinarec, Jelena; Nuskern, Lucija; Ježić, Marin; Rigling, Daniel; Ćurković-Perica, Mirna
Molecular evolution and invasion pattern of Cryphonectria hypovirus 1 in Europe: Mutation rate, and selection pressure differ between genome domains // Virology, 514 (2018), 156-164 doi:10.1016/j.virol.2017.11.011 (međunarodna recenzija, članak, znanstveni)


CROSBI ID: 916753 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
Molecular evolution and invasion pattern of Cryphonectria hypovirus 1 in Europe: Mutation rate, and selection pressure differ between genome domains

Autori
Mlinarec, Jelena ; Nuskern, Lucija ; Ježić, Marin ; Rigling, Daniel ; Ćurković-Perica, Mirna

Izvornik
Virology (0042-6822) 514 (2018); 156-164

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
Biological control ; Chestnut blight ; CHV1 ; Evolution ; Host parasite interactions ; Invasive species ; Mycoviruses ; Recombination

Sažetak
Understanding virus evolution is a fundamental goal of virology, evolutionary biology, and disease epidemiology. We provide a detailed analysis of evolution and origin of Cryphonectria hypovirus 1 (CHV1) populations in Europe, based on the complete genome sequence of all European subtypes. Phylogenetic analyses divided European strains into two closely related clades. Strains of the subtype I belong to the first, while strains of the subtypes F1, D and E belong to the second clade suggesting that the subtypes F1, D and E are more closely related than previously thought. Strains of the subtype F2 appeared to be recombinant ; subtypes F1/D/E contributed a larger fraction of sequence while subtype I contributed a smaller fraction. The p29 was the most variable domain, while the replication- associated large ORF B protein was the most conserved domain within the CHV1. Low sequence similarity, predominant negative selection and frequent recombination characterise the evolution of CHV1.

Izvorni jezik
Engleski

Znanstvena područja
Biologija



POVEZANOST RADA


Projekti:
SCOPES (Project no. IZ73Z0_152525/1)
HRZZ-IP-2013-11-5381 - Raznolikost i interakcije kestena, patogene gljive koja izaziva rak kestena i virusa koji inficira gljivu: učinak na oporavak kestena (Chestnut) (Ćurković Perica, Mirna, HRZZ - 2013-11) ( POIROT)

Ustanove:
Prirodoslovno-matematički fakultet, Zagreb

Citiraj ovu publikaciju

Mlinarec, Jelena; Nuskern, Lucija; Ježić, Marin; Rigling, Daniel; Ćurković-Perica, Mirna
Molecular evolution and invasion pattern of Cryphonectria hypovirus 1 in Europe: Mutation rate, and selection pressure differ between genome domains // Virology, 514 (2018), 156-164 doi:10.1016/j.virol.2017.11.011 (međunarodna recenzija, članak, znanstveni)
Mlinarec, J., Nuskern, L., Ježić, M., Rigling, D. & Ćurković-Perica, M. (2018) Molecular evolution and invasion pattern of Cryphonectria hypovirus 1 in Europe: Mutation rate, and selection pressure differ between genome domains. Virology, 514, 156-164 doi:10.1016/j.virol.2017.11.011.
@article{article, year = {2018}, pages = {156-164}, DOI = {10.1016/j.virol.2017.11.011}, keywords = {Biological control, Chestnut blight, CHV1, Evolution, Host parasite interactions, Invasive species, Mycoviruses, Recombination}, journal = {Virology}, doi = {10.1016/j.virol.2017.11.011}, volume = {514}, issn = {0042-6822}, title = {Molecular evolution and invasion pattern of Cryphonectria hypovirus 1 in Europe: Mutation rate, and selection pressure differ between genome domains}, keyword = {Biological control, Chestnut blight, CHV1, Evolution, Host parasite interactions, Invasive species, Mycoviruses, Recombination} }
@article{article, year = {2018}, pages = {156-164}, DOI = {10.1016/j.virol.2017.11.011}, keywords = {Biological control, Chestnut blight, CHV1, Evolution, Host parasite interactions, Invasive species, Mycoviruses, Recombination}, journal = {Virology}, doi = {10.1016/j.virol.2017.11.011}, volume = {514}, issn = {0042-6822}, title = {Molecular evolution and invasion pattern of Cryphonectria hypovirus 1 in Europe: Mutation rate, and selection pressure differ between genome domains}, keyword = {Biological control, Chestnut blight, CHV1, Evolution, Host parasite interactions, Invasive species, Mycoviruses, Recombination} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus
  • MEDLINE


Citati





    Contrast
    Increase Font
    Decrease Font
    Dyslexic Font