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Pregled bibliografske jedinice broj: 869816

Laboratory X-Ray Microtomography as a tool for 3D visualization of biofilm in porous media made up of zeolite


Ivankovic, Tomislav; Rolland du Roscoat, Sabine; Geindreau, Christian; Séchet, Philipe; Huang, Zhujun; Charier, Pascal; Martins Jean M.F.
Laboratory X-Ray Microtomography as a tool for 3D visualization of biofilm in porous media made up of zeolite // Microbiology Society Annual Conference 2017
Edinburgh, Ujedinjeno Kraljevstvo, 2017. (predavanje, međunarodna recenzija, sažetak, znanstveni)


CROSBI ID: 869816 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
Laboratory X-Ray Microtomography as a tool for 3D visualization of biofilm in porous media made up of zeolite

Autori
Ivankovic, Tomislav ; Rolland du Roscoat, Sabine ; Geindreau, Christian ; Séchet, Philipe ; Huang, Zhujun ; Charier, Pascal ; Martins Jean M.F.

Vrsta, podvrsta i kategorija rada
Sažeci sa skupova, sažetak, znanstveni

Skup
Microbiology Society Annual Conference 2017

Mjesto i datum
Edinburgh, Ujedinjeno Kraljevstvo, 03-06.04.2017

Vrsta sudjelovanja
Predavanje

Vrsta recenzije
Međunarodna recenzija

Ključne riječi
X-Ray Microtomography ; zeolite ; biofilm ; Bacillus cereus

Sažetak
The mesoscale 3D visualization and quantification of biofilms are essential for better understanding of the development of biofilm in porous media, such as biofilters. Laboratory X-ray microtomography is an imaging technique based on the absorption of X-ray by matter, and with the use of suitable contrast agent (1-chloronaphtalen) it is possible to differentiate three phases of a biofilter with developed biofilm: support media, biofilm and bulk liquid. During the experiment, biofilm was grown in duplicate in a mini biofilter (10 mm diameter, 200 mm length) for 9 days and then imaged with laboratory microtomograph. As a support media natural zeolite grains of 1-1.25 mm size fraction were used and as a model organism Bacillus cereus was chosen. After 9 days it was possible to visualize biofilm of >40 µm thickness as it encompasses zeolite grains. Image analysis allowed for biofilm 3D reconstruction and volume fraction quantification. In two “day 9” replicas the biofilm occupied respectively 55.3% and 57.9% of empty pore space, and 8.1% in “day 0”. The certain proportion of biofilm at “day 0” was an artifact ascribed to nutrient media trapped at grain/grain interface during the filling of contrast agent. To best of our knowledge this experiment is the first successful attempt to visualize 3D structure of biofilm inside a porous media filled with natural material by using laboratory X-Ray Microtomograph. From results obtained by two replicas compared to starting conditions it was concluded that biofilm could be visualized and quantified with satisfactory reproducibility and accuracy.

Izvorni jezik
Engleski

Znanstvena područja
Biologija



POVEZANOST RADA


Ustanove:
Prirodoslovno-matematički fakultet, Zagreb

Profili:

Avatar Url Tomislav Ivanković (autor)

Citiraj ovu publikaciju

Ivankovic, Tomislav; Rolland du Roscoat, Sabine; Geindreau, Christian; Séchet, Philipe; Huang, Zhujun; Charier, Pascal; Martins Jean M.F.
Laboratory X-Ray Microtomography as a tool for 3D visualization of biofilm in porous media made up of zeolite // Microbiology Society Annual Conference 2017
Edinburgh, Ujedinjeno Kraljevstvo, 2017. (predavanje, međunarodna recenzija, sažetak, znanstveni)
Ivankovic, T., Rolland du Roscoat, S., Geindreau, C., Séchet, P., Huang, Z., Charier, P. & Martins Jean M.F. (2017) Laboratory X-Ray Microtomography as a tool for 3D visualization of biofilm in porous media made up of zeolite. U: Microbiology Society Annual Conference 2017.
@article{article, year = {2017}, keywords = {X-Ray Microtomography, zeolite, biofilm, Bacillus cereus}, title = {Laboratory X-Ray Microtomography as a tool for 3D visualization of biofilm in porous media made up of zeolite}, keyword = {X-Ray Microtomography, zeolite, biofilm, Bacillus cereus}, publisherplace = {Edinburgh, Ujedinjeno Kraljevstvo} }
@article{article, year = {2017}, keywords = {X-Ray Microtomography, zeolite, biofilm, Bacillus cereus}, title = {Laboratory X-Ray Microtomography as a tool for 3D visualization of biofilm in porous media made up of zeolite}, keyword = {X-Ray Microtomography, zeolite, biofilm, Bacillus cereus}, publisherplace = {Edinburgh, Ujedinjeno Kraljevstvo} }




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