Nalazite se na CroRIS probnoj okolini. Ovdje evidentirani podaci neće biti pohranjeni u Informacijskom sustavu znanosti RH. Ako je ovo greška, CroRIS produkcijskoj okolini moguće je pristupi putem poveznice www.croris.hr
izvor podataka: crosbi

Limits of applicability of the Voronoi tessellation determined by centres of cell nuclei to epithelium morphology (CROSBI ID 235834)

Prilog u časopisu | izvorni znanstveni rad | međunarodna recenzija

Kaliman, Sara ; Jayachandran, Christina ; Rehfeldt, Florian ; Smith, Ana-Sunčana Limits of applicability of the Voronoi tessellation determined by centres of cell nuclei to epithelium morphology // Frontiers in physiology, 7 (2016), 551-1-551-7. doi: 10.3389/fphys.2016.00551

Podaci o odgovornosti

Kaliman, Sara ; Jayachandran, Christina ; Rehfeldt, Florian ; Smith, Ana-Sunčana

engleski

Limits of applicability of the Voronoi tessellation determined by centres of cell nuclei to epithelium morphology

It is well accepted that cells in the tissue can be regarded as tiles tessellating space. A number of approaches were developed to find an appropriate mathematical description of such cell tiling. A particularly useful approach is the so called Voronoi tessellation, built from centers of mass of the cell nuclei (CMVT), which is commonly used for estimating the morphology of cells in epithelial tissues. However, a study providing a statistically sound analysis of this method's accuracy is not available in the literature. We addressed this issue here by comparing a number of morphological measures of the cells, including area, perimeter, and elongation obtained from such a tessellation with identical measures extracted from direct imaging acquired by staining the cell membranes. After analyzing the shapes of 15, 000 MDCK II epithelial cells under several conditions, we find that CMVT reasonably well reproduces many of the morphological properties of the tissue with an error that is between 10 and 15%. Moreover, cross-correlations between different morphological measures are reproduced qualitatively correctly by this method. However, all of the properties including the cell perimeters, number of neighbors, and anisotropy measures often suffer from systematic or size dependent errors. These discrepancies originate from the polygonal nature of the tessellation which sets the limits of the applicability of CMVT.

epithelial tissue morphology ; Voronoi tessellation ; fluorescence microscopy ; nuclei segmentation ; image analysis ; MDCK ; cross-correlations ; cell shape

nije evidentirano

nije evidentirano

nije evidentirano

nije evidentirano

nije evidentirano

nije evidentirano

Podaci o izdanju

7

2016.

551-1-551-7

objavljeno

1664-042X

10.3389/fphys.2016.00551

Povezanost rada

Fizika, Biologija

Poveznice
Indeksiranost