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Pregled bibliografske jedinice broj: 778189

Aspects of DNA Assembly Acceleration on Reconfigurable Platforms


Sović, Ivan; Šikić, Mile; Skala, Karolj
Aspects of DNA Assembly Acceleration on Reconfigurable Platforms // PROCEEDINGS IT SYSTEMS 2013 / Žagar, Martin ; Knezović, Josip ; Mlinarić, Hrvoje ; Hofman Daniel, Kovač Mario (ur.).
Bol, Brač, Hrvatska: University of Zagreb, Faculty of Electrical Engineering and Computing, 2013. str. 289-292 (predavanje, međunarodna recenzija, cjeloviti rad (in extenso), znanstveni)


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Naslov
Aspects of DNA Assembly Acceleration on Reconfigurable Platforms

Autori
Sović, Ivan ; Šikić, Mile ; Skala, Karolj

Vrsta, podvrsta i kategorija rada
Radovi u zbornicima skupova, cjeloviti rad (in extenso), znanstveni

Izvornik
PROCEEDINGS IT SYSTEMS 2013 / Žagar, Martin ; Knezović, Josip ; Mlinarić, Hrvoje ; Hofman Daniel, Kovač Mario - Bol, Brač, Hrvatska : University of Zagreb, Faculty of Electrical Engineering and Computing, 2013, 289-292

ISBN
978-953-184-189-4

Skup
IT SYSTEMS 2013

Mjesto i datum
Bol, Brač, Hrvatska, 12 - 14.09.2013

Vrsta sudjelovanja
Predavanje

Vrsta recenzije
Međunarodna recenzija

Ključne riječi
de novo; reference; mapping; FPGA; systolic array

Sažetak
Modern DNA sequencing instruments produce read sequences that are considerably shorter than that of the genomes, or of the studied genomic features. In order to obtain the sequence of the entire genome, these sequences need to be assembled together. For this reason, DNA assembly is the first and the most important step in any genomics project. However, it presents a very computationally intensive and resource-consuming task. For this reason, various methods for DNA assembly acceleration are explored in practice. In this pap

Izvorni jezik
Engleski

Znanstvena područja
Računarstvo



POVEZANOST RADA


Ustanove:
Fakultet elektrotehnike i računarstva, Zagreb,
Institut "Ruđer Bošković", Zagreb

Profili:

Avatar Url Ivan Sović (autor)

Avatar Url Karolj Skala (autor)

Avatar Url Mile Šikić (autor)


Citiraj ovu publikaciju

Sović, Ivan; Šikić, Mile; Skala, Karolj
Aspects of DNA Assembly Acceleration on Reconfigurable Platforms // PROCEEDINGS IT SYSTEMS 2013 / Žagar, Martin ; Knezović, Josip ; Mlinarić, Hrvoje ; Hofman Daniel, Kovač Mario (ur.).
Bol, Brač, Hrvatska: University of Zagreb, Faculty of Electrical Engineering and Computing, 2013. str. 289-292 (predavanje, međunarodna recenzija, cjeloviti rad (in extenso), znanstveni)
Sović, I., Šikić, M. & Skala, K. (2013) Aspects of DNA Assembly Acceleration on Reconfigurable Platforms. U: Žagar, M., Knezović, J., Mlinarić, H. & Hofman Daniel, K. (ur.)PROCEEDINGS IT SYSTEMS 2013.
@article{article, year = {2013}, pages = {289-292}, keywords = {de novo, reference, mapping, FPGA, systolic array}, isbn = {978-953-184-189-4}, title = {Aspects of DNA Assembly Acceleration on Reconfigurable Platforms}, keyword = {de novo, reference, mapping, FPGA, systolic array}, publisher = {University of Zagreb, Faculty of Electrical Engineering and Computing}, publisherplace = {Bol, Bra\v{c}, Hrvatska} }
@article{article, year = {2013}, pages = {289-292}, keywords = {de novo, reference, mapping, FPGA, systolic array}, isbn = {978-953-184-189-4}, title = {Aspects of DNA Assembly Acceleration on Reconfigurable Platforms}, keyword = {de novo, reference, mapping, FPGA, systolic array}, publisher = {University of Zagreb, Faculty of Electrical Engineering and Computing}, publisherplace = {Bol, Bra\v{c}, Hrvatska} }




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