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Pregled bibliografske jedinice broj: 666689

Diverse Ty3-gypsy elements in sister Anemone and Pulsatilla genera: a structural and cytogenetic perspective


Mlinarec, Jelena; Besendorfer, Višnja
Diverse Ty3-gypsy elements in sister Anemone and Pulsatilla genera: a structural and cytogenetic perspective // BioSyst.EU 2013 Global systematics! / Kroh, Andreas et al. (ur.).
Vienna: Nobis Austria, 2013. str. 142-142 (poster, međunarodna recenzija, sažetak, znanstveni)


Naslov
Diverse Ty3-gypsy elements in sister Anemone and Pulsatilla genera: a structural and cytogenetic perspective

Autori
Mlinarec, Jelena ; Besendorfer, Višnja

Vrsta, podvrsta i kategorija rada
Sažeci sa skupova, sažetak, znanstveni

Izvornik
BioSyst.EU 2013 Global systematics! / Kroh, Andreas et al. - Vienna : Nobis Austria, 2013, 142-142

Skup
BioSyst.EU 2013 Global systematics!

Mjesto i datum
Beč, Austrija, 18-22.02.2013

Vrsta sudjelovanja
Poster

Vrsta recenzije
Međunarodna recenzija

Ključne riječi
Anemone; transposable elemnts; FISH; Ty3-gypsy clas of retroelements

Sažetak
Eukaryotic transposable elements (TEs) are ubiquitous and widespread mobile genetic entities. Genome divergence through transposable elements activity and recombination are ongoing processes that occur within species. We have surveyed highly repeated Ty3/Gypsy families, amplified by PCR in the members of three sister genera Anemone, Pulsatilla and Hepatica of the Anemoninae tribe using degenerative primer pairs matching Reverse Transcriptase (RT) and Integrase (Int). The Blast search identified all TEs as Tekay class of chromoviruses. In Anemone, isolated elements showed great variations considering size, structure and chromosomal position. Despite their dispersed organisation on chromosomes, in some Anemone species, the elements were absent from the DAPI positive heterochromatin regions, while in other species, they showed significant clustering in the DAPI positive heterochromatin regions. In all investigated Pulsatilla species, FISH showed pericentromeric localization of elements on chromosomes. In the phylogenetic tree, the sequences showed clear separation into several clades suggesting that at least two subfamilies of Tekay elements were isolated from the Anemoninae. Diverse organization of Ty3-gypsy elements in Anemone end Pulsatilla genera suggest that they play an important role in plant genome evolution and speciation.

Izvorni jezik
Engleski

Znanstvena područja
Biologija



POVEZANOST RADA


Projekt / tema
119-1191196-1201 - Organizacija, funkcija i mehanizmi evolucije biljnog genoma (Višnja Besendorfer, )

Ustanove
Prirodoslovno-matematički fakultet, Zagreb

Autor s matičnim brojem:
Višnja Besendorfer, (164980)