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Analysis of satellite DNAs in the sequenced genome of Tribolium castaneum (Coleoptera) (CROSBI ID 601379)

Prilog sa skupa u zborniku | sažetak izlaganja sa skupa | domaća recenzija

Meštrović, Nevenka ; Pavlek, Martina ; Žižek, Marta ; Plohl, Miroslav Analysis of satellite DNAs in the sequenced genome of Tribolium castaneum (Coleoptera) // 10. Hrvatski biološki kongres : zbornik sažetaka. 2009

Podaci o odgovornosti

Meštrović, Nevenka ; Pavlek, Martina ; Žižek, Marta ; Plohl, Miroslav

engleski

Analysis of satellite DNAs in the sequenced genome of Tribolium castaneum (Coleoptera)

The genome of the red flour beetle Tribolium castaneum was recently sequenced and draft assembly that represent about 70% of the genome was produced. It has been proposed that “unknown” parts of the genome represent regions of highly repetitive DNA that could not be assembled. In silico analysis of the abundance and distribution of repetitive DNA revealed that approximately 30% of the assembled genome is composed of repetitive DNA (Wang et al, Genome Biology 2008, 9:R61). In assembled genome satellite DNAs build only 2, 5%. This result is in contrast with experimental data which revealed that highly abundant (peri)centromeric 360 bp satellite makes up to 17 % of the genome. We will present our in silico and experimental analysis of newly identified satellite DNAs from reptig files that could not be assembled into scaffolds, as well as a comprehensive analysis of 360 bp satellite DNA described previously.

genome evolution; satellite DNA; Tribolium

nije evidentirano

nije evidentirano

nije evidentirano

nije evidentirano

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nije evidentirano

Podaci o prilogu

2009.

objavljeno

Podaci o matičnoj publikaciji

10. Hrvatski biološki kongres : zbornik sažetaka

Podaci o skupu

10. Hrvatski biološki kongres

poster

14.09.2009-29.09.2009

Osijek, Hrvatska

Povezanost rada

Biologija