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Pregled bibliografske jedinice broj: 621964

DADP: the database of anuran defense peptides


Novković, Mario; Simunić, Juraj; Bojović, Viktor; Tossi, Alessandro; Juretić, Davor
DADP: the database of anuran defense peptides // Bioinformatics, 28 (2012), 10; 1406-1407 doi:10.1093/bioinformatics/bts141 (međunarodna recenzija, članak, znanstveni)


CROSBI ID: 621964 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
DADP: the database of anuran defense peptides

Autori
Novković, Mario ; Simunić, Juraj ; Bojović, Viktor ; Tossi, Alessandro ; Juretić, Davor

Izvornik
Bioinformatics (1367-4803) 28 (2012), 10; 1406-1407

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
anuran; defense peptides; database; signal peptide; antimicrobial

Sažetak
Anuran tissues, and especially skin, are a rich source of bioactive peptides and their precursors. We here present a manually curated database of antimicrobial and other defense peptides with a total of 2571 entries, most of them in the precursor form with demarcated signal peptide (SP), acidic proregion(s) and bioactive moiety(s) corresponding to 1923 non-identical bioactive sequences. Search functions on the corresponding web server facilitate the extraction of six distinct SP classes. The more conserved of these can be used for searching cDNA and UniProtKB databases for potential bioactive peptides, for creating PROSITE search patterns, and for phylogenetic analysis.

Izvorni jezik
Engleski

Znanstvena područja
Biologija



POVEZANOST RADA


Projekt / tema
177-1770495-0476 - Razvoj i primjene principa maksimalne proizvodnje entropije (Davor Juretić, )

Ustanove
Institut "Ruđer Bošković", Zagreb,
Prirodoslovno-matematički fakultet, Split

Profili:

Avatar Url Davor Juretić (autor)

Avatar Url Juraj Simunić (autor)

Avatar Url Viktor Bojović (autor)

Citiraj ovu publikaciju

Novković, Mario; Simunić, Juraj; Bojović, Viktor; Tossi, Alessandro; Juretić, Davor
DADP: the database of anuran defense peptides // Bioinformatics, 28 (2012), 10; 1406-1407 doi:10.1093/bioinformatics/bts141 (međunarodna recenzija, članak, znanstveni)
Novković, M., Simunić, J., Bojović, V., Tossi, A. & Juretić, D. (2012) DADP: the database of anuran defense peptides. Bioinformatics, 28 (10), 1406-1407 doi:10.1093/bioinformatics/bts141.
@article{article, year = {2012}, pages = {1406-1407}, DOI = {10.1093/bioinformatics/bts141}, keywords = {anuran, defense peptides, database, signal peptide, antimicrobial}, journal = {Bioinformatics}, doi = {10.1093/bioinformatics/bts141}, volume = {28}, number = {10}, issn = {1367-4803}, title = {DADP: the database of anuran defense peptides}, keyword = {anuran, defense peptides, database, signal peptide, antimicrobial} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus
  • MEDLINE


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