Similarity and dissimilarity in correlations of genomic DNA (CROSBI ID 161676)
Prilog u časopisu | izvorni znanstveni rad | međunarodna recenzija
Podaci o odgovornosti
Podobnik, Boris ; Shao, Jia ; Dokholyand, Nikolay V. ; Zlatić, Vinko ; Stanley, H. Eugene ; Grosse, Ivo
engleski
Similarity and dissimilarity in correlations of genomic DNA
We analyze auto-correlations of human chromosomes 1–22 and rice chromosomes 1–12 for seven binary mapping rules and find that the correlation patterns are different for different rules but almost identical for all of the chromosomes, despite their varying lengths and gc contents. We propose a simple stochastic process for modeling these correlations, and we find that the proposed process can reproduce, quantitatively and qualitatively, the correlation patterns found in the genomes of human and rice.
autocorrelation ; humane chromosomes ; rice chromosomes
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Podaci o izdanju
373
2007.
497-502
objavljeno
0378-4371
1873-2119
10.1016/j.physa.2006.05.041