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Pregled bibliografske jedinice broj: 327263

Quantifying the increase in average human heterozygosity due to urbanisation


Rudan, Igor; Carothers, Andrew D.; Polašek, Ozren; Hayward, Caroline; Vitart, Veronique; Biloglav, Zrinka; Kolčić, Ivana; Zgaga, Lina; Ivanković, Davor; Vorko-Jović, Ariana et al.
Quantifying the increase in average human heterozygosity due to urbanisation // European Journal of Human Genetics, 16 (2008), 9; 1097-1102 doi:10.1038/ejhg.2008.48 (međunarodna recenzija, članak, znanstveni)


Naslov
Quantifying the increase in average human heterozygosity due to urbanisation

Autori
Rudan, Igor ; Carothers, Andrew D. ; Polašek, Ozren ; Hayward, Caroline ; Vitart, Veronique ; Biloglav, Zrinka ; Kolčić, Ivana ; Zgaga, Lina ; Ivanković, Davor ; Vorko-Jović, Ariana ; Wilson, James F. ; Weber, James L. ; Hastie, Nicholas D. ; Wright, Alan F. ; Campbell, Harry

Izvornik
European Journal of Human Genetics (1018-4813) 16 (2008), 9; 1097-1102

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
Inbreeding; consanguinity; outbreeding; admixture; humans; urbanization

Sažetak
The human population is undergoing a major transition from a historical metapopulation structure of relatively isolated small communities to an outbred structure. This process is predicted to increase average individual genome-wide heterozygosity (h) and could have effects on health. We attempted to quantify this increase in mean h. We initially sampled 1001 examinees from a metapopulation of nine isolated villages on five Dalmatian islands (Croatia). Village populations had high levels of genetic differentiation, endogamy and consanguinity. We then selected 166 individuals with highly specific personal genetic histories to form six subsamples, which could be ranked a priori by their predicted level of outbreeding. The measure h was then estimated in the 166 examinees by genotyping 1184 STR/indel markers and using two different computation methods. Compared to the value of mean h in the least outbred sample, values of h in the remaining samples increased successively with predicted outbreeding by 0.023, 0.038, 0.058, 0.067 and 0.079 (Po0.0001), where these values are measured on the same scale as the inbreeding coefficient (but opposite sign). We have shown that urbanisation was associated with an average increase in h of up to 0.08?0.10 in this Croatian metapopulation, regardless of the method used. Similar levels of differentiation have been described in many populations. Therefore, changes in the level of heterozygosity across the genome of this magnitude may be common during isolate break-up in humans and could have significant health effects through the established genetic mechanism of hybrid vigour/heterosis.

Izvorni jezik
Engleski

Znanstvena područja
Temeljne medicinske znanosti, Javno zdravstvo i zdravstvena zaštita



POVEZANOST RADA


Projekt / tema
198-1080315-0292 - Nasljedne i okolišne odrednice duboke starosti - hrvatski stogodišnjaci (Diana Rudan, )
216-1080315-0302 - Odrednice zdravlja i bolesti u općoj i izoliranim ljudskim populacijama (Ozren Polašek, )

Ustanove
Medicinski fakultet, Zagreb,
Medicinski fakultet, Split

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus
  • MEDLINE


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