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Pregled bibliografske jedinice broj: 2186

Similarity of structural features and evolution of satellite DNAs from Palorus subdepressus (Coleoptera) and related species


Plohl, Miroslav; Meštrović, Nevenka; Bruvo, Branka; Ugarković, Đurđica
Similarity of structural features and evolution of satellite DNAs from Palorus subdepressus (Coleoptera) and related species // Journal of molecular evolution, 46 (1998), 2; 234-239 (međunarodna recenzija, članak, znanstveni)


CROSBI ID: 2186 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
Similarity of structural features and evolution of satellite DNAs from Palorus subdepressus (Coleoptera) and related species

Autori
Plohl, Miroslav ; Meštrović, Nevenka ; Bruvo, Branka ; Ugarković, Đurđica

Izvornik
Journal of molecular evolution (0022-2844) 46 (1998), 2; 234-239

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
direct and inverted repeats; phylogenetic analysisi; DNA curvature; heterochromatin; Tenebrionidae

Sažetak
A novel highly abundant satellite DNA comprising 20% of the genome has been characterized in Palorus subdepressus (Insecta, Coleoptera). The 72 bp long monomer sequence is composed of two copies of T2A5T octanucleotide alternating with 22 nucleotides long elements of an inverted repeat. Phylogenetic analysis revealed clustering of monomer sequence variants into two clades. Two types of variants are prevalently organized in an alternating pattern, thus showing a tendency to generate a new complex repeating unit, 144 bp in length. Fluorescent in situ hybridization revealed even distribution of the satellite in the region of pericentric heterochromatin of all 20 chromosomes. P. subdepressus satellite sequence is clearly species specific, lacking similarity even with the satellite from congeneric species P. ratzeburgii. However, on the basis of similarity in predicted tertiary structure induced by intrinsic DNA curvature and in repeat length, P. subdepressus satellite can be classified into the same group with satellites from related tenebrionid species P. ratzeburgii, Tenebrio molitor and T. obscurus. It can be reasonably inferred that repetitive sequences of different origin evolve under constraints to adopt and conserve particular features. Obtained results suggest that the higher order structure and repeat length, but not the nucleotide sequence itself, are maintained through evolution of these species.

Izvorni jezik
Engleski

Znanstvena područja
Biologija



POVEZANOST RADA


Projekti:
00981006

Ustanove:
Institut "Ruđer Bošković", Zagreb


Citiraj ovu publikaciju

Plohl, Miroslav; Meštrović, Nevenka; Bruvo, Branka; Ugarković, Đurđica
Similarity of structural features and evolution of satellite DNAs from Palorus subdepressus (Coleoptera) and related species // Journal of molecular evolution, 46 (1998), 2; 234-239 (međunarodna recenzija, članak, znanstveni)
Plohl, M., Meštrović, N., Bruvo, B. & Ugarković, Đ. (1998) Similarity of structural features and evolution of satellite DNAs from Palorus subdepressus (Coleoptera) and related species. Journal of molecular evolution, 46 (2), 234-239.
@article{article, year = {1998}, pages = {234-239}, keywords = {direct and inverted repeats, phylogenetic analysisi, DNA curvature, heterochromatin, Tenebrionidae}, journal = {Journal of molecular evolution}, volume = {46}, number = {2}, issn = {0022-2844}, title = {Similarity of structural features and evolution of satellite DNAs from Palorus subdepressus (Coleoptera) and related species}, keyword = {direct and inverted repeats, phylogenetic analysisi, DNA curvature, heterochromatin, Tenebrionidae} }
@article{article, year = {1998}, pages = {234-239}, keywords = {direct and inverted repeats, phylogenetic analysisi, DNA curvature, heterochromatin, Tenebrionidae}, journal = {Journal of molecular evolution}, volume = {46}, number = {2}, issn = {0022-2844}, title = {Similarity of structural features and evolution of satellite DNAs from Palorus subdepressus (Coleoptera) and related species}, keyword = {direct and inverted repeats, phylogenetic analysisi, DNA curvature, heterochromatin, Tenebrionidae} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus
  • MEDLINE





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