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Pregled bibliografske jedinice broj: 1175428

Prevalence of Virus Infections and GLRaV-3 Genetic Diversity in Selected Clones of Croatian Indigenous Grapevine Cultivar Plavac Mali


Čarija, Mate; Radić, Tomislav; Černi, Silvija; Mucalo, Ana; Zdunić, Goran; Vončina, Darko; Jagunić, Martin; Hančević, Katarina
Prevalence of Virus Infections and GLRaV-3 Genetic Diversity in Selected Clones of Croatian Indigenous Grapevine Cultivar Plavac Mali // Pathogens, 11 (2022), 2; 176, 14 doi:10.3390/pathogens11020176 (međunarodna recenzija, članak, znanstveni)


CROSBI ID: 1175428 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
Prevalence of Virus Infections and GLRaV-3 Genetic Diversity in Selected Clones of Croatian Indigenous Grapevine Cultivar Plavac Mali

Autori
Čarija, Mate ; Radić, Tomislav ; Černi, Silvija ; Mucalo, Ana ; Zdunić, Goran ; Vončina, Darko ; Jagunić, Martin ; Hančević, Katarina

Izvornik
Pathogens (2076-0817) 11 (2022), 2; 176, 14

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
grapevine viruses ; indigenous cultivar ; leafroll ; screening ; molecular characterization

Sažetak
The cultivar Plavac Mali (Vitis vinifera L.), the most important indigenous red grapevine cultivar in Croatia, was tested for the presence of 16 grapevine viruses. Thirty-five samples from the collection vineyard were tested for the presence of grapevine leafroll-associated viruses-1, -2, and -3 (GLRaV-1, GLRaV-2 and GLRaV-3, respectively), grapevine fanleaf virus (GFLV), arabis mosaic virus (ArMV), grapevine virus-A (GVA), -B (GVB), -G (GVG), -H (GVH), -I (GVI), -J (GVJ), grapevine fleck virus (GFkV), grapevine rupestris stem pitting associated virus (GRSPaV), and grapevine pinot gris virus (GPGV) by reverse transcription–polymerase chain reaction (RT-PCR). Furthermore, standard PCR was conducted for grapevine badnavirus 1 (GBV-1) and grapevine red blotch virus (GRBV). Mixed infections were most common and GLRaV-3, the most abundant virus found in 85.71% of the vines tested, was further molecularly characterised. Different genomic variants of the heat shock protein homologue (HSP70h) were separated by cloning, detected by single-strand conformation polymorphism (SSCP) analysis, sequenced, and phylogenetically analysed. The presence of phylogenetic groups I and II was only confirmed. This study demonstrates the high virus infection rate of Plavac Mali vines and the heterogeneity of GLRaV-3 present nowadays in a collection vineyard.

Izvorni jezik
Engleski

Znanstvena područja
Biologija, Poljoprivreda (agronomija)



POVEZANOST RADA


Projekti:
IP-2018-01-9622 - Patogeni potencijal Virusa uvijenosti lista vinove loze 3 i njegova interakcija s domaćinskim biljkama (GRAPE-PATH3) (Hančević, Katarina, HRZZ - 2018-01) ( POIROT)
IP-2018-01-1305 - Ekologija i karakterizacija dva nova virusa vinove loze (ENVISaGE) (Voncina, Darko, HRZZ - 2018-01) ( POIROT)

Ustanove:
Institut za jadranske kulture i melioraciju krša, Split,
Prirodoslovno-matematički fakultet, Zagreb,
Agronomski fakultet, Zagreb

Poveznice na cjeloviti tekst rada:

doi

Citiraj ovu publikaciju:

Čarija, Mate; Radić, Tomislav; Černi, Silvija; Mucalo, Ana; Zdunić, Goran; Vončina, Darko; Jagunić, Martin; Hančević, Katarina
Prevalence of Virus Infections and GLRaV-3 Genetic Diversity in Selected Clones of Croatian Indigenous Grapevine Cultivar Plavac Mali // Pathogens, 11 (2022), 2; 176, 14 doi:10.3390/pathogens11020176 (međunarodna recenzija, članak, znanstveni)
Čarija, M., Radić, T., Černi, S., Mucalo, A., Zdunić, G., Vončina, D., Jagunić, M. & Hančević, K. (2022) Prevalence of Virus Infections and GLRaV-3 Genetic Diversity in Selected Clones of Croatian Indigenous Grapevine Cultivar Plavac Mali. Pathogens, 11 (2), 176, 14 doi:10.3390/pathogens11020176.
@article{article, author = {\v{C}arija, Mate and Radi\'{c}, Tomislav and \v{C}erni, Silvija and Mucalo, Ana and Zduni\'{c}, Goran and Von\v{c}ina, Darko and Jaguni\'{c}, Martin and Han\v{c}evi\'{c}, Katarina}, year = {2022}, pages = {14}, DOI = {10.3390/pathogens11020176}, chapter = {176}, keywords = {grapevine viruses, indigenous cultivar, leafroll, screening, molecular characterization}, journal = {Pathogens}, doi = {10.3390/pathogens11020176}, volume = {11}, number = {2}, issn = {2076-0817}, title = {Prevalence of Virus Infections and GLRaV-3 Genetic Diversity in Selected Clones of Croatian Indigenous Grapevine Cultivar Plavac Mali}, keyword = {grapevine viruses, indigenous cultivar, leafroll, screening, molecular characterization}, chapternumber = {176} }
@article{article, author = {\v{C}arija, Mate and Radi\'{c}, Tomislav and \v{C}erni, Silvija and Mucalo, Ana and Zduni\'{c}, Goran and Von\v{c}ina, Darko and Jaguni\'{c}, Martin and Han\v{c}evi\'{c}, Katarina}, year = {2022}, pages = {14}, DOI = {10.3390/pathogens11020176}, chapter = {176}, keywords = {grapevine viruses, indigenous cultivar, leafroll, screening, molecular characterization}, journal = {Pathogens}, doi = {10.3390/pathogens11020176}, volume = {11}, number = {2}, issn = {2076-0817}, title = {Prevalence of Virus Infections and GLRaV-3 Genetic Diversity in Selected Clones of Croatian Indigenous Grapevine Cultivar Plavac Mali}, keyword = {grapevine viruses, indigenous cultivar, leafroll, screening, molecular characterization}, chapternumber = {176} }

Časopis indeksira:


  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus


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