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Pregled bibliografske jedinice broj: 1166837

Large‐scale mitogenome sequencing reveals consecutive expansions of domestic taurine cattle and supports sporadic aurochs introgression


Cubric‐Curik, Vlatka; Novosel, Dinko; Brajkovic, Vladimir; Rota Stabelli, Omar; Krebs, Stefan; Sölkner, Johann; Šalamon, Dragica; Ristov, Strahil; Berger, Beate; Trivizaki, Stamatina et al.
Large‐scale mitogenome sequencing reveals consecutive expansions of domestic taurine cattle and supports sporadic aurochs introgression // Evolutionary Applications, 00 (2021), 1-16 doi:10.1111/eva.13315 (međunarodna recenzija, članak, znanstveni)


CROSBI ID: 1166837 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
Large‐scale mitogenome sequencing reveals consecutive expansions of domestic taurine cattle and supports sporadic aurochs introgression

Autori
Cubric‐Curik, Vlatka ; Novosel, Dinko ; Brajkovic, Vladimir ; Rota Stabelli, Omar ; Krebs, Stefan ; Sölkner, Johann ; Šalamon, Dragica ; Ristov, Strahil ; Berger, Beate ; Trivizaki, Stamatina ; Bizelis, Iosif ; Ferenčaković, Maja ; Rothammer, Sophie ; Kunz, Elisabeth ; Simčič, Mojca ; Dovč, Peter ; Bunevski, Gojko ; Bytyqi, Hysen ; Marković, Božidarka ; Brka, Muhamed ; Kume, Kristaq ; Stojanović, Srđan ; Nikolov, Vasil ; Zinovieva, Natalia ; Schönherz, Anna Amanda ; Guldbrandtsen, Bernt ; Čačić, Mato ; Radović, Siniša ; Miracle, Preston ; Vernesi, Cristiano ; Curik, Ino ; Medugorac, Ivica

Izvornik
Evolutionary Applications (1752-4571) 00 (2021); 1-16

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
aurochs introgression ; cattle ; diversity ; domestication ; mitogenome ; phylogenetics

Sažetak
The contribution of domestic cattle in human societies is enormous, making cattle, along with other essential benefits, the economically most important domestic animal in the world today. To expand existing knowledge on cattle domestication and mi-togenome diversity, we performed a comprehensive complete mitogenome analysis of the species (802 sequences, 114 breeds). A large sample was collected in South- east Europe, an important agricultural gateway to Europe during Neolithization and a region rich in cattle biodiversity. We found 1725 polymorphic sites (810 singletons, 853 parsimony-informative sites and 57 indels), 701 unique haplotypes, a haplotype diversity of 0.9995 and a nucleotide diversity of 0.0015. In addition to the dominant T3 and several rare haplogroups (Q, T5, T4, T2 and T1), we have identified maternal line in Austrian Murbodner cattle that possess surviving aurochs’ mitochondria haplo-type P1 that diverged prior to the Neolithization process. This is convincing evidence for rare female- mediated adaptive introgression of wild aurochs into domesticated cattle in Europe. We revalidated the existing haplogroup classification and provided Bayesian phylogenetic inference with a more precise estimated divergence time than previously available. Occasionally, classification based on partial mitogenomes was not reliable ; for example, some individuals with haplogroups P and T5 were not rec-ognized based on D- loop information. Bayesian skyline plot estimates (median) show that the earliest population growth began before domestication in cattle with haplo-group T2, followed by Q (~10.0– 9.5 kyBP), whereas cattle with T3 (~7.5 kyBP) and T1(~3.0– 2.5 kyBP) expanded later. Overall, our results support the existence of interac-tions between aurochs and cattle during domestication and dispersal of cattle in the past, contribute to the conservation of maternal cattle diversity and enable functional analyses of the surviving aurochs P1 mitogenome.

Izvorni jezik
Engleski

Znanstvena područja
Biologija, Poljoprivreda (agronomija), Arheologija



POVEZANOST RADA


Projekti:
IP-2018-01-8708 - Primjena NGS metoda u procjeni genomske varijabilnosti preživača (ANAGRAMS) (Čubrić Čurik, Vlatka, HRZZ - 2018-01) ( POIROT)

Ustanove:
Fakultet agrobiotehničkih znanosti Osijek,
Hrvatska akademija znanosti i umjetnosti,
Agronomski fakultet, Zagreb,
Arheološki muzej u Zagrebu

Poveznice na cjeloviti tekst rada:

doi onlinelibrary.wiley.com

Citiraj ovu publikaciju:

Cubric‐Curik, Vlatka; Novosel, Dinko; Brajkovic, Vladimir; Rota Stabelli, Omar; Krebs, Stefan; Sölkner, Johann; Šalamon, Dragica; Ristov, Strahil; Berger, Beate; Trivizaki, Stamatina et al.
Large‐scale mitogenome sequencing reveals consecutive expansions of domestic taurine cattle and supports sporadic aurochs introgression // Evolutionary Applications, 00 (2021), 1-16 doi:10.1111/eva.13315 (međunarodna recenzija, članak, znanstveni)
Cubric‐Curik, V., Novosel, D., Brajkovic, V., Rota Stabelli, O., Krebs, S., Sölkner, J., Šalamon, D., Ristov, S., Berger, B. & Trivizaki, S. (2021) Large‐scale mitogenome sequencing reveals consecutive expansions of domestic taurine cattle and supports sporadic aurochs introgression. Evolutionary Applications, 00, 1-16 doi:10.1111/eva.13315.
@article{article, author = {Cubric‐Curik, Vlatka and Novosel, Dinko and Brajkovic, Vladimir and Rota Stabelli, Omar and Krebs, Stefan and S\"{o}lkner, Johann and \v{S}alamon, Dragica and Ristov, Strahil and Berger, Beate and Trivizaki, Stamatina and Bizelis, Iosif and Feren\v{c}akovi\'{c}, Maja and Rothammer, Sophie and Kunz, Elisabeth and Sim\v{c}i\v{c}, Mojca and Dov\v{c}, Peter and Bunevski, Gojko and Bytyqi, Hysen and Markovi\'{c}, Bo\v{z}idarka and Brka, Muhamed and Kume, Kristaq and Stojanovi\'{c}, Sr\djan and Nikolov, Vasil and Zinovieva, Natalia and Sch\"{o}nherz, Anna Amanda and Guldbrandtsen, Bernt and \v{C}a\v{c}i\'{c}, Mato and Radovi\'{c}, Sini\v{s}a and Miracle, Preston and Vernesi, Cristiano and Curik, Ino and Medugorac, Ivica}, year = {2021}, pages = {1-16}, DOI = {10.1111/eva.13315}, keywords = {aurochs introgression, cattle, diversity, domestication, mitogenome, phylogenetics}, journal = {Evolutionary Applications}, doi = {10.1111/eva.13315}, volume = {00}, issn = {1752-4571}, title = {Large‐scale mitogenome sequencing reveals consecutive expansions of domestic taurine cattle and supports sporadic aurochs introgression}, keyword = {aurochs introgression, cattle, diversity, domestication, mitogenome, phylogenetics} }
@article{article, author = {Cubric‐Curik, Vlatka and Novosel, Dinko and Brajkovic, Vladimir and Rota Stabelli, Omar and Krebs, Stefan and S\"{o}lkner, Johann and \v{S}alamon, Dragica and Ristov, Strahil and Berger, Beate and Trivizaki, Stamatina and Bizelis, Iosif and Feren\v{c}akovi\'{c}, Maja and Rothammer, Sophie and Kunz, Elisabeth and Sim\v{c}i\v{c}, Mojca and Dov\v{c}, Peter and Bunevski, Gojko and Bytyqi, Hysen and Markovi\'{c}, Bo\v{z}idarka and Brka, Muhamed and Kume, Kristaq and Stojanovi\'{c}, Sr\djan and Nikolov, Vasil and Zinovieva, Natalia and Sch\"{o}nherz, Anna Amanda and Guldbrandtsen, Bernt and \v{C}a\v{c}i\'{c}, Mato and Radovi\'{c}, Sini\v{s}a and Miracle, Preston and Vernesi, Cristiano and Curik, Ino and Medugorac, Ivica}, year = {2021}, pages = {1-16}, DOI = {10.1111/eva.13315}, keywords = {aurochs introgression, cattle, diversity, domestication, mitogenome, phylogenetics}, journal = {Evolutionary Applications}, doi = {10.1111/eva.13315}, volume = {00}, issn = {1752-4571}, title = {Large‐scale mitogenome sequencing reveals consecutive expansions of domestic taurine cattle and supports sporadic aurochs introgression}, keyword = {aurochs introgression, cattle, diversity, domestication, mitogenome, phylogenetics} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus


Citati:





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