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Pregled bibliografske jedinice broj: 1119422

Microbe Detection Using Deep Learning


Baksa, Mirna
Microbe Detection Using Deep Learning, 2020., diplomski rad, diplomski, Fakultet elektrotehnike i računarstva, Zagreb


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Naslov
Microbe Detection Using Deep Learning

Autori
Baksa, Mirna

Vrsta, podvrsta i kategorija rada
Ocjenski radovi, diplomski rad, diplomski

Fakultet
Fakultet elektrotehnike i računarstva

Mjesto
Zagreb

Datum
16.09

Godina
2020

Stranica
67

Mentor
Šikić, Mile

Ključne riječi
bioinformatics, deep learning, triplet loss, autoencoder, classification

Sažetak
Microbes, omnipresent microorganisms invisible to the naked eye, impact many functions in the human body. The ability to detect and classify them is essential in order to discover diseases, prescribe medication, and keep a healthy lifestyle. The goal of this thesis is to develop a method for microbe detection based on a deep learning architecture. The architecture is designed to find suitable representations of signals corresponding to sequenced microbe DNA fragments. After finding the signal repre sentations, an appropriate distance metric is used to separate different species in the latent space. In the end, reads are classified using a suitable classifier.

Izvorni jezik
Engleski



POVEZANOST RADA


Projekti:
IP-2018-01-5886 - De novo sastavljanje genoma i metagenoma (SIGMA) (Šikić, Mile, HRZZ - 2018-01) ( POIROT)

Profili:

Avatar Url Mile Šikić (mentor)

Citiraj ovu publikaciju

Baksa, Mirna
Microbe Detection Using Deep Learning, 2020., diplomski rad, diplomski, Fakultet elektrotehnike i računarstva, Zagreb
Baksa, M. (2020) 'Microbe Detection Using Deep Learning', diplomski rad, diplomski, Fakultet elektrotehnike i računarstva, Zagreb.
@phdthesis{phdthesis, author = {Baksa, M.}, year = {2020}, pages = {67}, keywords = {bioinformatics, deep learning, triplet loss, autoencoder, classification}, title = {Microbe Detection Using Deep Learning}, keyword = {bioinformatics, deep learning, triplet loss, autoencoder, classification}, publisherplace = {Zagreb} }
@phdthesis{phdthesis, author = {Baksa, M.}, year = {2020}, pages = {67}, keywords = {bioinformatics, deep learning, triplet loss, autoencoder, classification}, title = {Microbe Detection Using Deep Learning}, keyword = {bioinformatics, deep learning, triplet loss, autoencoder, classification}, publisherplace = {Zagreb} }




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