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Pregled bibliografske jedinice broj: 1009405

High-quality draft genome sequence of Pseudomonas aeruginosa san ai, an environmental isolate resistant to heavy metals


Izrael‑Živković, Lidija; · Beškoski, Vladimir; · Rikalović, Milena; · Kazazić, Snježana; Shapiro, · Nicole; Woyke, · Tanja; · Gojgić‑Cvijović, Gordana; · Vrvić, Miroslav M.; ·Maksimović, Nela; Karadžić, Ivanka
High-quality draft genome sequence of Pseudomonas aeruginosa san ai, an environmental isolate resistant to heavy metals // Extremophiles, 23 (2019), 4; 399-405 doi:10.1007/s00792-019-01092-w (međunarodna recenzija, članak, znanstveni)


CROSBI ID: 1009405 Za ispravke kontaktirajte CROSBI podršku putem web obrasca

Naslov
High-quality draft genome sequence of Pseudomonas aeruginosa san ai, an environmental isolate resistant to heavy metals

Autori
Izrael‑Živković, Lidija ; · Beškoski, Vladimir ; · Rikalović, Milena ; · Kazazić, Snježana ; Shapiro, · Nicole ; Woyke, · Tanja ; · Gojgić‑Cvijović, Gordana ; · Vrvić, Miroslav M. ; ·Maksimović, Nela ; Karadžić, Ivanka

Izvornik
Extremophiles (1431-0651) 23 (2019), 4; 399-405

Vrsta, podvrsta i kategorija rada
Radovi u časopisima, članak, znanstveni

Ključne riječi
Pseudomonas aeruginosa ; Genome ; Environmental isolate ; Chemical pollution ; Cleaning polluted areas

Sažetak
The strain Pseudomonas aeruginosa san ai, isolated from an extreme environment (industrial mineral cutting oil, pH 10), is able to survive and persist in the presence of a variety of pollutants such as heavy metals and organic chemicals. The genome of P. aeruginosa san ai is 6.98 Mbp long with a GC content of 66.08% and 6485 protein encoding genes. A large number of genes associated with proteins, responsible for microbial resistance to heavy metal ions and involved in catabolism of toxic aromatic organic compounds were identified. P. aeruginosa san ai is a highly cadmium-resistant strain. Proteome analysis of biomass after cadmium exposal confirmed a high tolerance to sublethal concentrations of cadmium (100 mg/L), based on: extracellular biosorption, bioaccumulation, biofilm formation, controlled siderophore production and a pronounced metalloprotein synthesis. Proteins responsible for survival in osmostress conditions during exposure to elevated concentrations of cadmium (200 mg/L) demonstrate a strong genetic potential of P. aeruginosa san ai for survival and adaptation. Sequencing of P. aeruginosa san ai genome provides valuable insights into the evolution and adaptation of this microbe to environmental extremes at the whole-genome level, as well as how to optimally use the strain in bioremediation of chemically polluted sites.

Izvorni jezik
Engleski

Znanstvena područja
Interdisciplinarne prirodne znanosti



POVEZANOST RADA


Ustanove:
Institut "Ruđer Bošković", Zagreb

Profili:

Avatar Url Snježana Kazazić (autor)

Citiraj ovu publikaciju

Izrael‑Živković, Lidija; · Beškoski, Vladimir; · Rikalović, Milena; · Kazazić, Snježana; Shapiro, · Nicole; Woyke, · Tanja; · Gojgić‑Cvijović, Gordana; · Vrvić, Miroslav M.; ·Maksimović, Nela; Karadžić, Ivanka
High-quality draft genome sequence of Pseudomonas aeruginosa san ai, an environmental isolate resistant to heavy metals // Extremophiles, 23 (2019), 4; 399-405 doi:10.1007/s00792-019-01092-w (međunarodna recenzija, članak, znanstveni)
Izrael‑Živković, L., · Beškoski, V., · Rikalović, M., · Kazazić, S., Shapiro, ·., Woyke, ·., · Gojgić‑Cvijović, G., · Vrvić, M., ·Maksimović, N. & Karadžić, I. (2019) High-quality draft genome sequence of Pseudomonas aeruginosa san ai, an environmental isolate resistant to heavy metals. Extremophiles, 23 (4), 399-405 doi:10.1007/s00792-019-01092-w.
@article{article, year = {2019}, pages = {399-405}, DOI = {10.1007/s00792-019-01092-w}, keywords = {Pseudomonas aeruginosa, Genome, Environmental isolate, Chemical pollution, Cleaning polluted areas}, journal = {Extremophiles}, doi = {10.1007/s00792-019-01092-w}, volume = {23}, number = {4}, issn = {1431-0651}, title = {High-quality draft genome sequence of Pseudomonas aeruginosa san ai, an environmental isolate resistant to heavy metals}, keyword = {Pseudomonas aeruginosa, Genome, Environmental isolate, Chemical pollution, Cleaning polluted areas} }
@article{article, year = {2019}, pages = {399-405}, DOI = {10.1007/s00792-019-01092-w}, keywords = {Pseudomonas aeruginosa, Genome, Environmental isolate, Chemical pollution, Cleaning polluted areas}, journal = {Extremophiles}, doi = {10.1007/s00792-019-01092-w}, volume = {23}, number = {4}, issn = {1431-0651}, title = {High-quality draft genome sequence of Pseudomonas aeruginosa san ai, an environmental isolate resistant to heavy metals}, keyword = {Pseudomonas aeruginosa, Genome, Environmental isolate, Chemical pollution, Cleaning polluted areas} }

Časopis indeksira:


  • Current Contents Connect (CCC)
  • Web of Science Core Collection (WoSCC)
    • Science Citation Index Expanded (SCI-EXP)
    • SCI-EXP, SSCI i/ili A&HCI
  • Scopus
  • MEDLINE


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